908 lines
36 KiB
Python
908 lines
36 KiB
Python
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import functools
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import itertools
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import string
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import typing
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from collections import OrderedDict
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from typing import Set, Tuple, List, Dict, Union, Callable, Optional, TypeVar, cast, Any
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if typing.TYPE_CHECKING:
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# for docstrings in pycharm
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import numpy as np # noqa E401
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from . import EinopsError
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from ._backends import get_backend
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from .parsing import ParsedExpression, _ellipsis, AnonymousAxis
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Tensor = TypeVar("Tensor")
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ReductionCallable = Callable[[Tensor, Tuple[int, ...]], Tensor]
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Reduction = Union[str, ReductionCallable]
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_reductions = ("min", "max", "sum", "mean", "prod", "any", "all")
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# magic integers are required to stay within
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# traceable subset of language
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_unknown_axis_length = -999999
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_expected_axis_length = -99999
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def _product(sequence: List[int]) -> int:
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"""minimalistic product that works both with numbers and symbols. Supports empty lists"""
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result = 1
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for element in sequence:
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result *= element
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return result
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def _reduce_axes(tensor, reduction_type: Reduction, reduced_axes: List[int], backend):
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if callable(reduction_type):
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# custom callable
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return reduction_type(tensor, tuple(reduced_axes))
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else:
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# one of built-in operations
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assert reduction_type in _reductions
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if reduction_type == "mean":
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if not backend.is_float_type(tensor):
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raise NotImplementedError("reduce_mean is not available for non-floating tensors")
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return backend.reduce(tensor, reduction_type, tuple(reduced_axes))
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def _optimize_transformation(init_shapes, reduced_axes, axes_reordering, final_shapes):
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# 'collapses' neighboring axes if those participate in the result pattern in the same order
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# TODO add support for added_axes
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assert len(axes_reordering) + len(reduced_axes) == len(init_shapes)
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# joining consecutive axes that will be reduced
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# possibly we can skip this if all backends can optimize this (not sure)
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reduced_axes = tuple(sorted(reduced_axes))
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for i in range(len(reduced_axes) - 1)[::-1]:
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if reduced_axes[i] + 1 == reduced_axes[i + 1]:
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removed_axis = reduced_axes[i + 1]
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removed_length = init_shapes[removed_axis]
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init_shapes = init_shapes[:removed_axis] + init_shapes[removed_axis + 1 :]
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init_shapes[removed_axis - 1] *= removed_length
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reduced_axes = reduced_axes[: i + 1] + tuple(axis - 1 for axis in reduced_axes[i + 2 :])
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# removing axes that are moved together during reshape
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def build_mapping():
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init_to_final = {}
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for axis in range(len(init_shapes)):
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if axis in reduced_axes:
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init_to_final[axis] = None
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else:
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after_reduction = sum(x is not None for x in init_to_final.values())
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init_to_final[axis] = list(axes_reordering).index(after_reduction)
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return init_to_final
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init_axis_to_final_axis = build_mapping()
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for init_axis in range(len(init_shapes) - 1)[::-1]:
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if init_axis_to_final_axis[init_axis] is None:
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continue
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if init_axis_to_final_axis[init_axis + 1] is None:
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continue
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if init_axis_to_final_axis[init_axis] + 1 == init_axis_to_final_axis[init_axis + 1]:
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removed_axis = init_axis + 1
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removed_length = init_shapes[removed_axis]
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removed_axis_after_reduction = sum(x not in reduced_axes for x in range(removed_axis))
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reduced_axes = tuple(axis if axis < removed_axis else axis - 1 for axis in reduced_axes)
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init_shapes = init_shapes[:removed_axis] + init_shapes[removed_axis + 1 :]
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init_shapes[removed_axis - 1] *= removed_length
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old_reordering = axes_reordering
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axes_reordering = []
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for axis in old_reordering:
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if axis == removed_axis_after_reduction:
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pass
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elif axis < removed_axis_after_reduction:
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axes_reordering.append(axis)
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else:
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axes_reordering.append(axis - 1)
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init_axis_to_final_axis = build_mapping()
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return init_shapes, reduced_axes, axes_reordering, final_shapes
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CookedRecipe = Tuple[Optional[List[int]], Optional[List[int]], List[int], Dict[int, int], Optional[List[int]], int]
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# Actual type is tuple[tuple[str, int], ...]
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# However torch.jit.script does not "understand" the correct type,
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# and torch_specific will use list version.
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HashableAxesLengths = Tuple[Tuple[str, int], ...]
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FakeHashableAxesLengths = List[Tuple[str, int]]
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class TransformRecipe:
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"""
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Recipe describes actual computation pathway.
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Recipe can be applied to a tensor or variable.
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"""
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# structure is non-mutable. In future, this can be non-mutable dataclass (python 3.7+)
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# update: pytorch 2.0 torch.jit.script seems to have problems with dataclasses unless they were explicitly provided
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def __init__(
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self,
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# list of sizes (or just sizes) for elementary axes as they appear in left expression.
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# this is what (after computing unknown parts) will be a shape after first transposition.
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# This does not include any ellipsis dimensions.
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elementary_axes_lengths: List[int],
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# if additional axes are provided, they should be set in prev array
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# This shows mapping from name to position
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axis_name2elementary_axis: Dict[str, int],
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# each dimension in input can help to reconstruct length of one elementary axis
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# or verify one of dimensions. Each element points to element of elementary_axes_lengths.
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input_composition_known_unknown: List[Tuple[List[int], List[int]]],
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# permutation applied to elementary axes, if ellipsis is absent
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axes_permutation: List[int],
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# permutation puts reduced axes in the end, we only need to know the first position.
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first_reduced_axis: int,
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# at which positions which of elementary axes should appear. Axis position -> axis index.
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added_axes: Dict[int, int],
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# ids of axes as they appear in result, again pointers to elementary_axes_lengths,
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# only used to infer result dimensions
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output_composite_axes: List[List[int]],
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):
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self.elementary_axes_lengths: List[int] = elementary_axes_lengths
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self.axis_name2elementary_axis: Dict[str, int] = axis_name2elementary_axis
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self.input_composition_known_unknown: List[Tuple[List[int], List[int]]] = input_composition_known_unknown
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self.axes_permutation: List[int] = axes_permutation
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self.first_reduced_axis: int = first_reduced_axis
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self.added_axes: Dict[int, int] = added_axes
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self.output_composite_axes: List[List[int]] = output_composite_axes
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def _reconstruct_from_shape_uncached(
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self: TransformRecipe, shape: List[int], axes_dims: FakeHashableAxesLengths
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) -> CookedRecipe:
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"""
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Reconstruct all actual parameters using shape.
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Shape is a tuple that may contain integers, shape symbols (tf, theano) and UnknownSize (tf, previously mxnet)
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known axes can be integers or symbols, but not Nones.
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"""
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# magic number
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need_init_reshape = False
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# last axis is allocated for collapsed ellipsis
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axes_lengths: List[int] = list(self.elementary_axes_lengths)
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for axis, dim in axes_dims:
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axes_lengths[self.axis_name2elementary_axis[axis]] = dim
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for input_axis, (known_axes, unknown_axes) in enumerate(self.input_composition_known_unknown):
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length = shape[input_axis]
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if len(known_axes) == 0 and len(unknown_axes) == 1:
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# shortcut for the most common case
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axes_lengths[unknown_axes[0]] = length
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continue
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known_product = 1
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for axis in known_axes:
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known_product *= axes_lengths[axis]
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if len(unknown_axes) == 0:
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if isinstance(length, int) and isinstance(known_product, int) and length != known_product:
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raise EinopsError(f"Shape mismatch, {length} != {known_product}")
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else:
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# assert len(unknown_axes) == 1, 'this is enforced when recipe is created, so commented out'
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if isinstance(length, int) and isinstance(known_product, int) and length % known_product != 0:
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raise EinopsError(f"Shape mismatch, can't divide axis of length {length} in chunks of {known_product}")
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unknown_axis = unknown_axes[0]
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inferred_length: int = length // known_product
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axes_lengths[unknown_axis] = inferred_length
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if len(known_axes) + len(unknown_axes) != 1:
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need_init_reshape = True
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# at this point all axes_lengths are computed (either have values or variables, but not Nones)
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# elementary axes are ordered as they appear in input, then all added axes
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init_shapes: Optional[List[int]] = axes_lengths[: len(self.axes_permutation)] if need_init_reshape else None
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need_final_reshape = False
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final_shapes: List[int] = []
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for grouping in self.output_composite_axes:
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lengths = [axes_lengths[elementary_axis] for elementary_axis in grouping]
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final_shapes.append(_product(lengths))
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if len(lengths) != 1:
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need_final_reshape = True
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added_axes: Dict[int, int] = {
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pos: axes_lengths[pos_in_elementary] for pos, pos_in_elementary in self.added_axes.items()
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}
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# this list can be empty
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reduced_axes = list(range(self.first_reduced_axis, len(self.axes_permutation)))
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n_axes_after_adding_axes = len(added_axes) + len(self.axes_permutation)
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axes_reordering: Optional[List[int]] = self.axes_permutation
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if self.axes_permutation == list(range(len(self.axes_permutation))):
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axes_reordering = None
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_final_shapes = final_shapes if need_final_reshape else None
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return init_shapes, axes_reordering, reduced_axes, added_axes, _final_shapes, n_axes_after_adding_axes
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_reconstruct_from_shape = functools.lru_cache(1024)(_reconstruct_from_shape_uncached)
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def _apply_recipe(
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backend, recipe: TransformRecipe, tensor: Tensor, reduction_type: Reduction, axes_lengths: HashableAxesLengths
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) -> Tensor:
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# this method implements actual work for all backends for 3 operations
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try:
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init_shapes, axes_reordering, reduced_axes, added_axes, final_shapes, n_axes_w_added = _reconstruct_from_shape(
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recipe, backend.shape(tensor), axes_lengths
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)
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except TypeError:
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# shape or one of passed axes lengths is not hashable (i.e. they are symbols)
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_result = _reconstruct_from_shape_uncached(recipe, backend.shape(tensor), axes_lengths)
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(init_shapes, axes_reordering, reduced_axes, added_axes, final_shapes, n_axes_w_added) = _result
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if init_shapes is not None:
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tensor = backend.reshape(tensor, init_shapes)
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if axes_reordering is not None:
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tensor = backend.transpose(tensor, axes_reordering)
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if len(reduced_axes) > 0:
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tensor = _reduce_axes(tensor, reduction_type=reduction_type, reduced_axes=reduced_axes, backend=backend)
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if len(added_axes) > 0:
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tensor = backend.add_axes(tensor, n_axes=n_axes_w_added, pos2len=added_axes)
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if final_shapes is not None:
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tensor = backend.reshape(tensor, final_shapes)
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return tensor
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def _apply_recipe_array_api(
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xp, recipe: TransformRecipe, tensor: Tensor, reduction_type: Reduction, axes_lengths: HashableAxesLengths
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) -> Tensor:
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# completely-inline implementation
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init_shapes, axes_reordering, reduced_axes, added_axes, final_shapes, n_axes_w_added = _reconstruct_from_shape(
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recipe, tensor.shape, axes_lengths
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)
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if init_shapes is not None:
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tensor = xp.reshape(tensor, init_shapes)
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if axes_reordering is not None:
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tensor = xp.permute_dims(tensor, axes_reordering)
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if len(reduced_axes) > 0:
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if callable(reduction_type):
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# custom callable
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tensor = reduction_type(tensor, tuple(reduced_axes))
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else:
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# one of built-in operations
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assert reduction_type in _reductions
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tensor = getattr(xp, reduction_type)(tensor, axis=tuple(reduced_axes))
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if len(added_axes) > 0:
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# we use broadcasting
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for axis_position, axis_length in added_axes.items():
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tensor = xp.expand_dims(tensor, axis=axis_position)
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final_shape = list(tensor.shape)
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for axis_position, axis_length in added_axes.items():
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final_shape[axis_position] = axis_length
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tensor = xp.broadcast_to(tensor, final_shape)
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if final_shapes is not None:
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tensor = xp.reshape(tensor, final_shapes)
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return tensor
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@functools.lru_cache(256)
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def _prepare_transformation_recipe(
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pattern: str,
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operation: Reduction,
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axes_names: Tuple[str, ...],
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ndim: int,
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) -> TransformRecipe:
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"""Perform initial parsing of pattern and provided supplementary info
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axes_lengths is a tuple of tuples (axis_name, axis_length)
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"""
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left_str, rght_str = pattern.split("->")
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left = ParsedExpression(left_str)
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rght = ParsedExpression(rght_str)
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# checking that axes are in agreement - new axes appear only in repeat, while disappear only in reduction
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if not left.has_ellipsis and rght.has_ellipsis:
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raise EinopsError("Ellipsis found in right side, but not left side of a pattern {}".format(pattern))
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if left.has_ellipsis and left.has_ellipsis_parenthesized:
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raise EinopsError("Ellipsis inside parenthesis in the left side is not allowed: {}".format(pattern))
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if operation == "rearrange":
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if left.has_non_unitary_anonymous_axes or rght.has_non_unitary_anonymous_axes:
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raise EinopsError("Non-unitary anonymous axes are not supported in rearrange (exception is length 1)")
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difference = set.symmetric_difference(left.identifiers, rght.identifiers)
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if len(difference) > 0:
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raise EinopsError("Identifiers only on one side of expression (should be on both): {}".format(difference))
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elif operation == "repeat":
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difference = set.difference(left.identifiers, rght.identifiers)
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if len(difference) > 0:
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raise EinopsError("Unexpected identifiers on the left side of repeat: {}".format(difference))
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axes_without_size = set.difference(
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{ax for ax in rght.identifiers if not isinstance(ax, AnonymousAxis)},
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{*left.identifiers, *axes_names},
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)
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if len(axes_without_size) > 0:
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raise EinopsError("Specify sizes for new axes in repeat: {}".format(axes_without_size))
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elif operation in _reductions or callable(operation):
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difference = set.difference(rght.identifiers, left.identifiers)
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if len(difference) > 0:
|
||
|
|
raise EinopsError("Unexpected identifiers on the right side of reduce {}: {}".format(operation, difference))
|
||
|
|
else:
|
||
|
|
raise EinopsError("Unknown reduction {}. Expect one of {}.".format(operation, _reductions))
|
||
|
|
|
||
|
|
if left.has_ellipsis:
|
||
|
|
n_other_dims = len(left.composition) - 1
|
||
|
|
if ndim < n_other_dims:
|
||
|
|
raise EinopsError(f"Wrong shape: expected >={n_other_dims} dims. Received {ndim}-dim tensor.")
|
||
|
|
ellipsis_ndim = ndim - n_other_dims
|
||
|
|
ell_axes = [_ellipsis + str(i) for i in range(ellipsis_ndim)]
|
||
|
|
left_composition = []
|
||
|
|
for composite_axis in left.composition:
|
||
|
|
if composite_axis == _ellipsis:
|
||
|
|
for axis in ell_axes:
|
||
|
|
left_composition.append([axis])
|
||
|
|
else:
|
||
|
|
left_composition.append(composite_axis)
|
||
|
|
|
||
|
|
rght_composition = []
|
||
|
|
for composite_axis in rght.composition:
|
||
|
|
if composite_axis == _ellipsis:
|
||
|
|
for axis in ell_axes:
|
||
|
|
rght_composition.append([axis])
|
||
|
|
else:
|
||
|
|
group = []
|
||
|
|
for axis in composite_axis:
|
||
|
|
if axis == _ellipsis:
|
||
|
|
group.extend(ell_axes)
|
||
|
|
else:
|
||
|
|
group.append(axis)
|
||
|
|
rght_composition.append(group)
|
||
|
|
|
||
|
|
left.identifiers.update(ell_axes)
|
||
|
|
left.identifiers.remove(_ellipsis)
|
||
|
|
if rght.has_ellipsis:
|
||
|
|
rght.identifiers.update(ell_axes)
|
||
|
|
rght.identifiers.remove(_ellipsis)
|
||
|
|
else:
|
||
|
|
if ndim != len(left.composition):
|
||
|
|
raise EinopsError(f"Wrong shape: expected {len(left.composition)} dims. Received {ndim}-dim tensor.")
|
||
|
|
left_composition = left.composition
|
||
|
|
rght_composition = rght.composition
|
||
|
|
|
||
|
|
# parsing all dimensions to find out lengths
|
||
|
|
axis_name2known_length: Dict[Union[str, AnonymousAxis], int] = OrderedDict()
|
||
|
|
for composite_axis in left_composition:
|
||
|
|
for axis_name in composite_axis:
|
||
|
|
if isinstance(axis_name, AnonymousAxis):
|
||
|
|
axis_name2known_length[axis_name] = axis_name.value
|
||
|
|
else:
|
||
|
|
axis_name2known_length[axis_name] = _unknown_axis_length
|
||
|
|
|
||
|
|
# axis_ids_after_first_reshape = range(len(axis_name2known_length)) at this point
|
||
|
|
|
||
|
|
repeat_axes_names = []
|
||
|
|
for axis_name in rght.identifiers:
|
||
|
|
if axis_name not in axis_name2known_length:
|
||
|
|
if isinstance(axis_name, AnonymousAxis):
|
||
|
|
axis_name2known_length[axis_name] = axis_name.value
|
||
|
|
else:
|
||
|
|
axis_name2known_length[axis_name] = _unknown_axis_length
|
||
|
|
repeat_axes_names.append(axis_name)
|
||
|
|
|
||
|
|
axis_name2position = {name: position for position, name in enumerate(axis_name2known_length)}
|
||
|
|
|
||
|
|
# axes provided as kwargs
|
||
|
|
for elementary_axis in axes_names:
|
||
|
|
if not ParsedExpression.check_axis_name(elementary_axis):
|
||
|
|
raise EinopsError("Invalid name for an axis", elementary_axis)
|
||
|
|
if elementary_axis not in axis_name2known_length:
|
||
|
|
raise EinopsError("Axis {} is not used in transform".format(elementary_axis))
|
||
|
|
axis_name2known_length[elementary_axis] = _expected_axis_length
|
||
|
|
|
||
|
|
input_axes_known_unknown = []
|
||
|
|
# some shapes are inferred later - all information is prepared for faster inference
|
||
|
|
for i, composite_axis in enumerate(left_composition):
|
||
|
|
known: Set[str] = {axis for axis in composite_axis if axis_name2known_length[axis] != _unknown_axis_length}
|
||
|
|
unknown: Set[str] = {axis for axis in composite_axis if axis_name2known_length[axis] == _unknown_axis_length}
|
||
|
|
if len(unknown) > 1:
|
||
|
|
raise EinopsError("Could not infer sizes for {}".format(unknown))
|
||
|
|
assert len(unknown) + len(known) == len(composite_axis)
|
||
|
|
input_axes_known_unknown.append(
|
||
|
|
([axis_name2position[axis] for axis in known], [axis_name2position[axis] for axis in unknown])
|
||
|
|
)
|
||
|
|
|
||
|
|
axis_position_after_reduction: Dict[str, int] = {}
|
||
|
|
for axis_name in itertools.chain(*left_composition):
|
||
|
|
if axis_name in rght.identifiers:
|
||
|
|
axis_position_after_reduction[axis_name] = len(axis_position_after_reduction)
|
||
|
|
|
||
|
|
result_axes_grouping: List[List[int]] = [
|
||
|
|
[axis_name2position[axis] for axis in composite_axis] for i, composite_axis in enumerate(rght_composition)
|
||
|
|
]
|
||
|
|
|
||
|
|
ordered_axis_left = list(itertools.chain(*left_composition))
|
||
|
|
ordered_axis_rght = list(itertools.chain(*rght_composition))
|
||
|
|
reduced_axes = [axis for axis in ordered_axis_left if axis not in rght.identifiers]
|
||
|
|
order_after_transposition = [axis for axis in ordered_axis_rght if axis in left.identifiers] + reduced_axes
|
||
|
|
axes_permutation = [ordered_axis_left.index(axis) for axis in order_after_transposition]
|
||
|
|
added_axes = {
|
||
|
|
i: axis_name2position[axis_name]
|
||
|
|
for i, axis_name in enumerate(ordered_axis_rght)
|
||
|
|
if axis_name not in left.identifiers
|
||
|
|
}
|
||
|
|
|
||
|
|
first_reduced_axis = len(order_after_transposition) - len(reduced_axes)
|
||
|
|
|
||
|
|
return TransformRecipe(
|
||
|
|
elementary_axes_lengths=list(axis_name2known_length.values()),
|
||
|
|
axis_name2elementary_axis={axis: axis_name2position[axis] for axis in axes_names},
|
||
|
|
input_composition_known_unknown=input_axes_known_unknown,
|
||
|
|
axes_permutation=axes_permutation,
|
||
|
|
first_reduced_axis=first_reduced_axis,
|
||
|
|
added_axes=added_axes,
|
||
|
|
output_composite_axes=result_axes_grouping,
|
||
|
|
)
|
||
|
|
|
||
|
|
|
||
|
|
def _prepare_recipes_for_all_dims(
|
||
|
|
pattern: str, operation: Reduction, axes_names: Tuple[str, ...]
|
||
|
|
) -> Dict[int, TransformRecipe]:
|
||
|
|
"""
|
||
|
|
Internal function, used in layers.
|
||
|
|
Layer makes all recipe creation when it is initialized, thus to keep recipes simple we pre-compute for all dims
|
||
|
|
"""
|
||
|
|
left_str, rght_str = pattern.split("->")
|
||
|
|
left = ParsedExpression(left_str)
|
||
|
|
dims = [len(left.composition)]
|
||
|
|
if left.has_ellipsis:
|
||
|
|
dims = [len(left.composition) - 1 + ellipsis_dims for ellipsis_dims in range(8)]
|
||
|
|
return {ndim: _prepare_transformation_recipe(pattern, operation, axes_names, ndim=ndim) for ndim in dims}
|
||
|
|
|
||
|
|
|
||
|
|
def reduce(tensor: Union[Tensor, List[Tensor]], pattern: str, reduction: Reduction, **axes_lengths: int) -> Tensor:
|
||
|
|
"""
|
||
|
|
einops.reduce provides combination of reordering and reduction using reader-friendly notation.
|
||
|
|
|
||
|
|
Examples for reduce operation:
|
||
|
|
|
||
|
|
```python
|
||
|
|
>>> x = np.random.randn(100, 32, 64)
|
||
|
|
|
||
|
|
# perform max-reduction on the first axis
|
||
|
|
>>> y = reduce(x, 't b c -> b c', 'max')
|
||
|
|
|
||
|
|
# same as previous, but with clearer axes meaning
|
||
|
|
>>> y = reduce(x, 'time batch channel -> batch channel', 'max')
|
||
|
|
|
||
|
|
>>> x = np.random.randn(10, 20, 30, 40)
|
||
|
|
|
||
|
|
# 2d max-pooling with kernel size = 2 * 2 for image processing
|
||
|
|
>>> y1 = reduce(x, 'b c (h1 h2) (w1 w2) -> b c h1 w1', 'max', h2=2, w2=2)
|
||
|
|
|
||
|
|
# if one wants to go back to the original height and width, depth-to-space trick can be applied
|
||
|
|
>>> y2 = rearrange(y1, 'b (c h2 w2) h1 w1 -> b c (h1 h2) (w1 w2)', h2=2, w2=2)
|
||
|
|
>>> assert parse_shape(x, 'b _ h w') == parse_shape(y2, 'b _ h w')
|
||
|
|
|
||
|
|
# Adaptive 2d max-pooling to 3 * 4 grid
|
||
|
|
>>> reduce(x, 'b c (h1 h2) (w1 w2) -> b c h1 w1', 'max', h1=3, w1=4).shape
|
||
|
|
(10, 20, 3, 4)
|
||
|
|
|
||
|
|
# Global average pooling
|
||
|
|
>>> reduce(x, 'b c h w -> b c', 'mean').shape
|
||
|
|
(10, 20)
|
||
|
|
|
||
|
|
# Subtracting mean over batch for each channel
|
||
|
|
>>> y = x - reduce(x, 'b c h w -> () c () ()', 'mean')
|
||
|
|
|
||
|
|
# Subtracting per-image mean for each channel
|
||
|
|
>>> y = x - reduce(x, 'b c h w -> b c () ()', 'mean')
|
||
|
|
|
||
|
|
```
|
||
|
|
|
||
|
|
Parameters:
|
||
|
|
tensor: tensor: tensor of any supported library (e.g. numpy.ndarray, tensorflow, pytorch).
|
||
|
|
list of tensors is also accepted, those should be of the same type and shape
|
||
|
|
pattern: string, reduction pattern
|
||
|
|
reduction: one of available reductions ('min', 'max', 'sum', 'mean', 'prod'), case-sensitive
|
||
|
|
alternatively, a callable f(tensor, reduced_axes) -> tensor can be provided.
|
||
|
|
This allows using various reductions, examples: np.max, tf.reduce_logsumexp, torch.var, etc.
|
||
|
|
axes_lengths: any additional specifications for dimensions
|
||
|
|
|
||
|
|
Returns:
|
||
|
|
tensor of the same type as input
|
||
|
|
"""
|
||
|
|
try:
|
||
|
|
if isinstance(tensor, list):
|
||
|
|
if len(tensor) == 0:
|
||
|
|
raise TypeError("Rearrange/Reduce/Repeat can't be applied to an empty list")
|
||
|
|
backend = get_backend(tensor[0])
|
||
|
|
tensor = backend.stack_on_zeroth_dimension(tensor)
|
||
|
|
else:
|
||
|
|
backend = get_backend(tensor)
|
||
|
|
|
||
|
|
hashable_axes_lengths = tuple(axes_lengths.items())
|
||
|
|
shape = backend.shape(tensor)
|
||
|
|
recipe = _prepare_transformation_recipe(pattern, reduction, axes_names=tuple(axes_lengths), ndim=len(shape))
|
||
|
|
return _apply_recipe(
|
||
|
|
backend, recipe, cast(Tensor, tensor), reduction_type=reduction, axes_lengths=hashable_axes_lengths
|
||
|
|
)
|
||
|
|
except EinopsError as e:
|
||
|
|
message = ' Error while processing {}-reduction pattern "{}".'.format(reduction, pattern)
|
||
|
|
if not isinstance(tensor, list):
|
||
|
|
message += "\n Input tensor shape: {}. ".format(shape)
|
||
|
|
else:
|
||
|
|
message += "\n Input is list. "
|
||
|
|
message += "Additional info: {}.".format(axes_lengths)
|
||
|
|
raise EinopsError(message + "\n {}".format(e))
|
||
|
|
|
||
|
|
|
||
|
|
def rearrange(tensor: Union[Tensor, List[Tensor]], pattern: str, **axes_lengths) -> Tensor:
|
||
|
|
"""
|
||
|
|
einops.rearrange is a reader-friendly smart element reordering for multidimensional tensors.
|
||
|
|
This operation includes functionality of transpose (axes permutation), reshape (view), squeeze, unsqueeze,
|
||
|
|
stack, concatenate and other operations.
|
||
|
|
|
||
|
|
Examples for rearrange operation:
|
||
|
|
|
||
|
|
```python
|
||
|
|
# suppose we have a set of 32 images in "h w c" format (height-width-channel)
|
||
|
|
>>> images = [np.random.randn(30, 40, 3) for _ in range(32)]
|
||
|
|
|
||
|
|
# stack along first (batch) axis, output is a single array
|
||
|
|
>>> rearrange(images, 'b h w c -> b h w c').shape
|
||
|
|
(32, 30, 40, 3)
|
||
|
|
|
||
|
|
# concatenate images along height (vertical axis), 960 = 32 * 30
|
||
|
|
>>> rearrange(images, 'b h w c -> (b h) w c').shape
|
||
|
|
(960, 40, 3)
|
||
|
|
|
||
|
|
# concatenated images along horizontal axis, 1280 = 32 * 40
|
||
|
|
>>> rearrange(images, 'b h w c -> h (b w) c').shape
|
||
|
|
(30, 1280, 3)
|
||
|
|
|
||
|
|
# reordered axes to "b c h w" format for deep learning
|
||
|
|
>>> rearrange(images, 'b h w c -> b c h w').shape
|
||
|
|
(32, 3, 30, 40)
|
||
|
|
|
||
|
|
# flattened each image into a vector, 3600 = 30 * 40 * 3
|
||
|
|
>>> rearrange(images, 'b h w c -> b (c h w)').shape
|
||
|
|
(32, 3600)
|
||
|
|
|
||
|
|
# split each image into 4 smaller (top-left, top-right, bottom-left, bottom-right), 128 = 32 * 2 * 2
|
||
|
|
>>> rearrange(images, 'b (h1 h) (w1 w) c -> (b h1 w1) h w c', h1=2, w1=2).shape
|
||
|
|
(128, 15, 20, 3)
|
||
|
|
|
||
|
|
# space-to-depth operation
|
||
|
|
>>> rearrange(images, 'b (h h1) (w w1) c -> b h w (c h1 w1)', h1=2, w1=2).shape
|
||
|
|
(32, 15, 20, 12)
|
||
|
|
|
||
|
|
```
|
||
|
|
|
||
|
|
When composing axes, C-order enumeration used (consecutive elements have different last axis)
|
||
|
|
Find more examples in einops tutorial.
|
||
|
|
|
||
|
|
Parameters:
|
||
|
|
tensor: tensor of any supported library (e.g. numpy.ndarray, tensorflow, pytorch).
|
||
|
|
list of tensors is also accepted, those should be of the same type and shape
|
||
|
|
pattern: string, rearrangement pattern
|
||
|
|
axes_lengths: any additional specifications for dimensions
|
||
|
|
|
||
|
|
Returns:
|
||
|
|
tensor of the same type as input. If possible, a view to the original tensor is returned.
|
||
|
|
|
||
|
|
"""
|
||
|
|
return reduce(tensor, pattern, reduction="rearrange", **axes_lengths)
|
||
|
|
|
||
|
|
|
||
|
|
def repeat(tensor: Union[Tensor, List[Tensor]], pattern: str, **axes_lengths) -> Tensor:
|
||
|
|
"""
|
||
|
|
einops.repeat allows reordering elements and repeating them in arbitrary combinations.
|
||
|
|
This operation includes functionality of repeat, tile, broadcast functions.
|
||
|
|
|
||
|
|
Examples for repeat operation:
|
||
|
|
|
||
|
|
```python
|
||
|
|
# a grayscale image (of shape height x width)
|
||
|
|
>>> image = np.random.randn(30, 40)
|
||
|
|
|
||
|
|
# change it to RGB format by repeating in each channel
|
||
|
|
>>> repeat(image, 'h w -> h w c', c=3).shape
|
||
|
|
(30, 40, 3)
|
||
|
|
|
||
|
|
# repeat image 2 times along height (vertical axis)
|
||
|
|
>>> repeat(image, 'h w -> (repeat h) w', repeat=2).shape
|
||
|
|
(60, 40)
|
||
|
|
|
||
|
|
# repeat image 2 time along height and 3 times along width
|
||
|
|
>>> repeat(image, 'h w -> (h2 h) (w3 w)', h2=2, w3=3).shape
|
||
|
|
(60, 120)
|
||
|
|
|
||
|
|
# convert each pixel to a small square 2x2. Upsample image by 2x
|
||
|
|
>>> repeat(image, 'h w -> (h h2) (w w2)', h2=2, w2=2).shape
|
||
|
|
(60, 80)
|
||
|
|
|
||
|
|
# pixelate image first by downsampling by 2x, then upsampling
|
||
|
|
>>> downsampled = reduce(image, '(h h2) (w w2) -> h w', 'mean', h2=2, w2=2)
|
||
|
|
>>> repeat(downsampled, 'h w -> (h h2) (w w2)', h2=2, w2=2).shape
|
||
|
|
(30, 40)
|
||
|
|
|
||
|
|
```
|
||
|
|
|
||
|
|
When composing axes, C-order enumeration used (consecutive elements have different last axis)
|
||
|
|
Find more examples in einops tutorial.
|
||
|
|
|
||
|
|
Parameters:
|
||
|
|
tensor: tensor of any supported library (e.g. numpy.ndarray, tensorflow, pytorch).
|
||
|
|
list of tensors is also accepted, those should be of the same type and shape
|
||
|
|
pattern: string, rearrangement pattern
|
||
|
|
axes_lengths: any additional specifications for dimensions
|
||
|
|
|
||
|
|
Returns:
|
||
|
|
Tensor of the same type as input. If possible, a view to the original tensor is returned.
|
||
|
|
|
||
|
|
"""
|
||
|
|
return reduce(tensor, pattern, reduction="repeat", **axes_lengths)
|
||
|
|
|
||
|
|
|
||
|
|
def parse_shape(x, pattern: str) -> dict:
|
||
|
|
"""
|
||
|
|
Parse a tensor shape to dictionary mapping axes names to their lengths.
|
||
|
|
|
||
|
|
```python
|
||
|
|
# Use underscore to skip the dimension in parsing.
|
||
|
|
>>> x = np.zeros([2, 3, 5, 7])
|
||
|
|
>>> parse_shape(x, 'batch _ h w')
|
||
|
|
{'batch': 2, 'h': 5, 'w': 7}
|
||
|
|
|
||
|
|
# `parse_shape` output can be used to specify axes_lengths for other operations:
|
||
|
|
>>> y = np.zeros([700])
|
||
|
|
>>> rearrange(y, '(b c h w) -> b c h w', **parse_shape(x, 'b _ h w')).shape
|
||
|
|
(2, 10, 5, 7)
|
||
|
|
|
||
|
|
```
|
||
|
|
|
||
|
|
For symbolic frameworks may return symbols, not integers.
|
||
|
|
|
||
|
|
Parameters:
|
||
|
|
x: tensor of any supported framework
|
||
|
|
pattern: str, space separated names for axes, underscore means skip axis
|
||
|
|
|
||
|
|
Returns:
|
||
|
|
dict, maps axes names to their lengths
|
||
|
|
"""
|
||
|
|
exp = ParsedExpression(pattern, allow_underscore=True)
|
||
|
|
shape = get_backend(x).shape(x)
|
||
|
|
if exp.has_composed_axes():
|
||
|
|
raise RuntimeError(f"Can't parse shape with composite axes: {pattern} {shape}")
|
||
|
|
if len(shape) != len(exp.composition):
|
||
|
|
if exp.has_ellipsis:
|
||
|
|
if len(shape) < len(exp.composition) - 1:
|
||
|
|
raise RuntimeError(f"Can't parse shape with this number of dimensions: {pattern} {shape}")
|
||
|
|
else:
|
||
|
|
raise RuntimeError(f"Can't parse shape with different number of dimensions: {pattern} {shape}")
|
||
|
|
if exp.has_ellipsis:
|
||
|
|
ellipsis_idx = exp.composition.index(_ellipsis)
|
||
|
|
composition = (
|
||
|
|
exp.composition[:ellipsis_idx]
|
||
|
|
+ ["_"] * (len(shape) - len(exp.composition) + 1)
|
||
|
|
+ exp.composition[ellipsis_idx + 1 :]
|
||
|
|
)
|
||
|
|
else:
|
||
|
|
composition = exp.composition
|
||
|
|
result = {}
|
||
|
|
for axes, axis_length in zip(composition, shape): # type: ignore
|
||
|
|
# axes either [], or [AnonymousAxis] or ['axis_name']
|
||
|
|
if len(axes) == 0:
|
||
|
|
if axis_length != 1:
|
||
|
|
raise RuntimeError(f"Length of axis is not 1: {pattern} {shape}")
|
||
|
|
else:
|
||
|
|
[axis] = axes
|
||
|
|
if isinstance(axis, str):
|
||
|
|
if axis != "_":
|
||
|
|
result[axis] = axis_length
|
||
|
|
else:
|
||
|
|
if axis.value != axis_length:
|
||
|
|
raise RuntimeError(f"Length of anonymous axis does not match: {pattern} {shape}")
|
||
|
|
return result
|
||
|
|
|
||
|
|
|
||
|
|
# _enumerate_directions is not exposed in the public API
|
||
|
|
def _enumerate_directions(x):
|
||
|
|
"""
|
||
|
|
For an n-dimensional tensor, returns tensors to enumerate each axis.
|
||
|
|
```python
|
||
|
|
x = np.zeros([2, 3, 4]) # or any other tensor
|
||
|
|
i, j, k = _enumerate_directions(x)
|
||
|
|
result = i + 2*j + 3*k
|
||
|
|
```
|
||
|
|
|
||
|
|
`result[i, j, k] = i + 2j + 3k`, and also has the same shape as result
|
||
|
|
Works very similarly to numpy.ogrid (open indexing grid)
|
||
|
|
"""
|
||
|
|
backend = get_backend(x)
|
||
|
|
shape = backend.shape(x)
|
||
|
|
result = []
|
||
|
|
for axis_id, axis_length in enumerate(shape):
|
||
|
|
shape = [1] * len(shape)
|
||
|
|
shape[axis_id] = axis_length
|
||
|
|
result.append(backend.reshape(backend.arange(0, axis_length), shape))
|
||
|
|
return result
|
||
|
|
|
||
|
|
|
||
|
|
# to avoid importing numpy
|
||
|
|
np_ndarray = Any
|
||
|
|
|
||
|
|
|
||
|
|
def asnumpy(tensor) -> np_ndarray:
|
||
|
|
"""
|
||
|
|
Convert a tensor of an imperative framework (i.e. numpy/cupy/torch/jax/etc.) to `numpy.ndarray`
|
||
|
|
|
||
|
|
Parameters:
|
||
|
|
tensor: tensor of any known imperative framework
|
||
|
|
|
||
|
|
Returns:
|
||
|
|
`numpy.ndarray`, converted to numpy
|
||
|
|
"""
|
||
|
|
return get_backend(tensor).to_numpy(tensor)
|
||
|
|
|
||
|
|
|
||
|
|
def _validate_einsum_axis_name(axis_name):
|
||
|
|
if len(axis_name) == 0:
|
||
|
|
raise NotImplementedError("Singleton () axes are not yet supported in einsum.")
|
||
|
|
if len(axis_name) > 1:
|
||
|
|
raise NotImplementedError("Shape rearrangement is not yet supported in einsum.")
|
||
|
|
|
||
|
|
axis_name = axis_name[0]
|
||
|
|
|
||
|
|
if isinstance(axis_name, AnonymousAxis):
|
||
|
|
raise NotImplementedError("Anonymous axes are not yet supported in einsum.")
|
||
|
|
if len(axis_name) == 0:
|
||
|
|
raise RuntimeError("Encountered empty axis name in einsum.")
|
||
|
|
if not isinstance(axis_name, str):
|
||
|
|
raise RuntimeError("Axis name in einsum must be a string.")
|
||
|
|
|
||
|
|
|
||
|
|
@functools.lru_cache(256)
|
||
|
|
def _compactify_pattern_for_einsum(pattern: str) -> str:
|
||
|
|
if "->" not in pattern:
|
||
|
|
# numpy allows this, so make sure users
|
||
|
|
# don't accidentally do something like this.
|
||
|
|
raise ValueError("Einsum pattern must contain '->'.")
|
||
|
|
lefts_str, right_str = pattern.split("->")
|
||
|
|
|
||
|
|
lefts = [ParsedExpression(left, allow_underscore=True, allow_duplicates=True) for left in lefts_str.split(",")]
|
||
|
|
|
||
|
|
right = ParsedExpression(right_str, allow_underscore=True)
|
||
|
|
|
||
|
|
# Start from 'a' and go up to 'Z'
|
||
|
|
output_axis_names = string.ascii_letters
|
||
|
|
i = 0
|
||
|
|
axis_name_mapping = {}
|
||
|
|
|
||
|
|
left_patterns = []
|
||
|
|
for left in lefts:
|
||
|
|
left_pattern = ""
|
||
|
|
for raw_axis_name in left.composition:
|
||
|
|
if raw_axis_name == _ellipsis:
|
||
|
|
left_pattern += "..."
|
||
|
|
continue
|
||
|
|
|
||
|
|
_validate_einsum_axis_name(raw_axis_name)
|
||
|
|
axis_name = raw_axis_name[0]
|
||
|
|
if axis_name not in axis_name_mapping:
|
||
|
|
if i >= len(output_axis_names):
|
||
|
|
raise RuntimeError("Too many axes in einsum.")
|
||
|
|
axis_name_mapping[axis_name] = output_axis_names[i]
|
||
|
|
i += 1
|
||
|
|
|
||
|
|
left_pattern += axis_name_mapping[axis_name]
|
||
|
|
left_patterns.append(left_pattern)
|
||
|
|
|
||
|
|
compact_pattern = ",".join(left_patterns) + "->"
|
||
|
|
|
||
|
|
for raw_axis_name in right.composition:
|
||
|
|
if raw_axis_name == _ellipsis:
|
||
|
|
compact_pattern += "..."
|
||
|
|
continue
|
||
|
|
|
||
|
|
_validate_einsum_axis_name(raw_axis_name)
|
||
|
|
axis_name = raw_axis_name[0]
|
||
|
|
|
||
|
|
if axis_name not in axis_name_mapping:
|
||
|
|
raise EinopsError(f"Unknown axis {axis_name} on right side of einsum {pattern}.")
|
||
|
|
|
||
|
|
compact_pattern += axis_name_mapping[axis_name]
|
||
|
|
|
||
|
|
return compact_pattern
|
||
|
|
|
||
|
|
|
||
|
|
@typing.overload
|
||
|
|
def einsum(tensor: Tensor, pattern: str, /) -> Tensor: ...
|
||
|
|
|
||
|
|
|
||
|
|
@typing.overload
|
||
|
|
def einsum(tensor1: Tensor, tensor2: Tensor, pattern: str, /) -> Tensor: ...
|
||
|
|
|
||
|
|
|
||
|
|
@typing.overload
|
||
|
|
def einsum(tensor1: Tensor, tensor2: Tensor, tensor3: Tensor, pattern: str, /) -> Tensor: ...
|
||
|
|
|
||
|
|
|
||
|
|
@typing.overload
|
||
|
|
def einsum(tensor1: Tensor, tensor2: Tensor, tensor3: Tensor, tensor4: Tensor, pattern: str, /) -> Tensor: ...
|
||
|
|
|
||
|
|
|
||
|
|
def einsum(*tensors_and_pattern: Union[Tensor, str]) -> Tensor:
|
||
|
|
r"""
|
||
|
|
einops.einsum calls einsum operations with einops-style named
|
||
|
|
axes indexing, computing tensor products with an arbitrary
|
||
|
|
number of tensors. Unlike typical einsum syntax, here you must
|
||
|
|
pass tensors first, and then the pattern.
|
||
|
|
|
||
|
|
Also, note that rearrange operations such as `"(batch chan) out"`,
|
||
|
|
or singleton axes `()`, are not currently supported.
|
||
|
|
|
||
|
|
Examples:
|
||
|
|
|
||
|
|
For a given pattern such as:
|
||
|
|
```python
|
||
|
|
>>> x, y, z = np.random.randn(3, 20, 20, 20)
|
||
|
|
>>> output = einsum(x, y, z, "a b c, c b d, a g k -> a b k")
|
||
|
|
|
||
|
|
```
|
||
|
|
the following formula is computed:
|
||
|
|
```tex
|
||
|
|
output[a, b, k] =
|
||
|
|
\sum_{c, d, g} x[a, b, c] * y[c, b, d] * z[a, g, k]
|
||
|
|
```
|
||
|
|
where the summation over `c`, `d`, and `g` is performed
|
||
|
|
because those axes names do not appear on the right-hand side.
|
||
|
|
|
||
|
|
Let's see some additional examples:
|
||
|
|
```python
|
||
|
|
# Filter a set of images:
|
||
|
|
>>> batched_images = np.random.randn(128, 16, 16)
|
||
|
|
>>> filters = np.random.randn(16, 16, 30)
|
||
|
|
>>> result = einsum(batched_images, filters,
|
||
|
|
... "batch h w, h w channel -> batch channel")
|
||
|
|
>>> result.shape
|
||
|
|
(128, 30)
|
||
|
|
|
||
|
|
# Matrix multiplication, with an unknown input shape:
|
||
|
|
>>> batch_shape = (50, 30)
|
||
|
|
>>> data = np.random.randn(*batch_shape, 20)
|
||
|
|
>>> weights = np.random.randn(10, 20)
|
||
|
|
>>> result = einsum(weights, data,
|
||
|
|
... "out_dim in_dim, ... in_dim -> ... out_dim")
|
||
|
|
>>> result.shape
|
||
|
|
(50, 30, 10)
|
||
|
|
|
||
|
|
# Matrix trace on a single tensor:
|
||
|
|
>>> matrix = np.random.randn(10, 10)
|
||
|
|
>>> result = einsum(matrix, "i i ->")
|
||
|
|
>>> result.shape
|
||
|
|
()
|
||
|
|
|
||
|
|
```
|
||
|
|
|
||
|
|
Parameters:
|
||
|
|
tensors_and_pattern:
|
||
|
|
tensors: tensors of any supported library (numpy, tensorflow, pytorch, jax).
|
||
|
|
pattern: string, einsum pattern, with commas
|
||
|
|
separating specifications for each tensor.
|
||
|
|
pattern should be provided after all tensors.
|
||
|
|
|
||
|
|
Returns:
|
||
|
|
Tensor of the same type as input, after processing with einsum.
|
||
|
|
|
||
|
|
"""
|
||
|
|
if len(tensors_and_pattern) <= 1:
|
||
|
|
raise ValueError(
|
||
|
|
"`einops.einsum` takes at minimum two arguments: the tensors (at least one), followed by the pattern."
|
||
|
|
)
|
||
|
|
pattern = tensors_and_pattern[-1]
|
||
|
|
if not isinstance(pattern, str):
|
||
|
|
raise ValueError(
|
||
|
|
"The last argument passed to `einops.einsum` must be a string, representing the einsum pattern."
|
||
|
|
)
|
||
|
|
tensors = tensors_and_pattern[:-1]
|
||
|
|
pattern = _compactify_pattern_for_einsum(pattern)
|
||
|
|
return get_backend(tensors[0]).einsum(pattern, *tensors)
|