332 lines
12 KiB
Python
332 lines
12 KiB
Python
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import pytest
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import networkx as nx
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from networkx.utils import nodes_equal
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from .test_graph import BaseAttrGraphTester, BaseGraphTester
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from .test_graph import TestEdgeSubgraph as _TestGraphEdgeSubgraph
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from .test_graph import TestGraph as _TestGraph
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class BaseDiGraphTester(BaseGraphTester):
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def test_has_successor(self):
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G = self.K3
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assert G.has_successor(0, 1)
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assert not G.has_successor(0, -1)
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def test_successors(self):
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G = self.K3
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assert sorted(G.successors(0)) == [1, 2]
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with pytest.raises(nx.NetworkXError):
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G.successors(-1)
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def test_has_predecessor(self):
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G = self.K3
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assert G.has_predecessor(0, 1)
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assert not G.has_predecessor(0, -1)
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def test_predecessors(self):
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G = self.K3
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assert sorted(G.predecessors(0)) == [1, 2]
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with pytest.raises(nx.NetworkXError):
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G.predecessors(-1)
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def test_edges(self):
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G = self.K3
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assert sorted(G.edges()) == [(0, 1), (0, 2), (1, 0), (1, 2), (2, 0), (2, 1)]
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assert sorted(G.edges(0)) == [(0, 1), (0, 2)]
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assert sorted(G.edges([0, 1])) == [(0, 1), (0, 2), (1, 0), (1, 2)]
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with pytest.raises(nx.NetworkXError):
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G.edges(-1)
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def test_out_edges(self):
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G = self.K3
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assert sorted(G.out_edges()) == [(0, 1), (0, 2), (1, 0), (1, 2), (2, 0), (2, 1)]
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assert sorted(G.out_edges(0)) == [(0, 1), (0, 2)]
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with pytest.raises(nx.NetworkXError):
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G.out_edges(-1)
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def test_out_edges_dir(self):
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G = self.P3
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assert sorted(G.out_edges()) == [(0, 1), (1, 2)]
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assert sorted(G.out_edges(0)) == [(0, 1)]
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assert sorted(G.out_edges(2)) == []
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def test_out_edges_data(self):
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G = nx.DiGraph([(0, 1, {"data": 0}), (1, 0, {})])
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assert sorted(G.out_edges(data=True)) == [(0, 1, {"data": 0}), (1, 0, {})]
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assert sorted(G.out_edges(0, data=True)) == [(0, 1, {"data": 0})]
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assert sorted(G.out_edges(data="data")) == [(0, 1, 0), (1, 0, None)]
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assert sorted(G.out_edges(0, data="data")) == [(0, 1, 0)]
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def test_in_edges_dir(self):
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G = self.P3
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assert sorted(G.in_edges()) == [(0, 1), (1, 2)]
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assert sorted(G.in_edges(0)) == []
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assert sorted(G.in_edges(2)) == [(1, 2)]
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def test_in_edges_data(self):
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G = nx.DiGraph([(0, 1, {"data": 0}), (1, 0, {})])
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assert sorted(G.in_edges(data=True)) == [(0, 1, {"data": 0}), (1, 0, {})]
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assert sorted(G.in_edges(1, data=True)) == [(0, 1, {"data": 0})]
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assert sorted(G.in_edges(data="data")) == [(0, 1, 0), (1, 0, None)]
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assert sorted(G.in_edges(1, data="data")) == [(0, 1, 0)]
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def test_degree(self):
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G = self.K3
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assert sorted(G.degree()) == [(0, 4), (1, 4), (2, 4)]
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assert dict(G.degree()) == {0: 4, 1: 4, 2: 4}
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assert G.degree(0) == 4
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assert list(G.degree(iter([0]))) == [(0, 4)] # run through iterator
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def test_in_degree(self):
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G = self.K3
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assert sorted(G.in_degree()) == [(0, 2), (1, 2), (2, 2)]
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assert dict(G.in_degree()) == {0: 2, 1: 2, 2: 2}
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assert G.in_degree(0) == 2
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assert list(G.in_degree(iter([0]))) == [(0, 2)] # run through iterator
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def test_out_degree(self):
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G = self.K3
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assert sorted(G.out_degree()) == [(0, 2), (1, 2), (2, 2)]
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assert dict(G.out_degree()) == {0: 2, 1: 2, 2: 2}
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assert G.out_degree(0) == 2
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assert list(G.out_degree(iter([0]))) == [(0, 2)]
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def test_size(self):
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G = self.K3
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assert G.size() == 6
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assert G.number_of_edges() == 6
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def test_to_undirected_reciprocal(self):
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G = self.Graph()
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G.add_edge(1, 2)
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assert G.to_undirected().has_edge(1, 2)
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assert not G.to_undirected(reciprocal=True).has_edge(1, 2)
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G.add_edge(2, 1)
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assert G.to_undirected(reciprocal=True).has_edge(1, 2)
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def test_reverse_copy(self):
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G = nx.DiGraph([(0, 1), (1, 2)])
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R = G.reverse()
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assert sorted(R.edges()) == [(1, 0), (2, 1)]
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R.remove_edge(1, 0)
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assert sorted(R.edges()) == [(2, 1)]
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assert sorted(G.edges()) == [(0, 1), (1, 2)]
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def test_reverse_nocopy(self):
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G = nx.DiGraph([(0, 1), (1, 2)])
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R = G.reverse(copy=False)
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assert sorted(R.edges()) == [(1, 0), (2, 1)]
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with pytest.raises(nx.NetworkXError):
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R.remove_edge(1, 0)
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def test_reverse_hashable(self):
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class Foo:
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pass
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x = Foo()
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y = Foo()
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G = nx.DiGraph()
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G.add_edge(x, y)
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assert nodes_equal(G.nodes(), G.reverse().nodes())
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assert [(y, x)] == list(G.reverse().edges())
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def test_di_cache_reset(self):
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G = self.K3.copy()
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old_succ = G.succ
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assert id(G.succ) == id(old_succ)
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old_adj = G.adj
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assert id(G.adj) == id(old_adj)
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G._succ = {}
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assert id(G.succ) != id(old_succ)
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assert id(G.adj) != id(old_adj)
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old_pred = G.pred
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assert id(G.pred) == id(old_pred)
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G._pred = {}
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assert id(G.pred) != id(old_pred)
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def test_di_attributes_cached(self):
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G = self.K3.copy()
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assert id(G.in_edges) == id(G.in_edges)
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assert id(G.out_edges) == id(G.out_edges)
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assert id(G.in_degree) == id(G.in_degree)
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assert id(G.out_degree) == id(G.out_degree)
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assert id(G.succ) == id(G.succ)
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assert id(G.pred) == id(G.pred)
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class BaseAttrDiGraphTester(BaseDiGraphTester, BaseAttrGraphTester):
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def test_edges_data(self):
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G = self.K3
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all_edges = [
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(0, 1, {}),
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(0, 2, {}),
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(1, 0, {}),
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(1, 2, {}),
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(2, 0, {}),
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(2, 1, {}),
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]
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assert sorted(G.edges(data=True)) == all_edges
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assert sorted(G.edges(0, data=True)) == all_edges[:2]
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assert sorted(G.edges([0, 1], data=True)) == all_edges[:4]
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with pytest.raises(nx.NetworkXError):
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G.edges(-1, True)
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def test_in_degree_weighted(self):
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G = self.K3.copy()
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G.add_edge(0, 1, weight=0.3, other=1.2)
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assert sorted(G.in_degree(weight="weight")) == [(0, 2), (1, 1.3), (2, 2)]
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assert dict(G.in_degree(weight="weight")) == {0: 2, 1: 1.3, 2: 2}
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assert G.in_degree(1, weight="weight") == 1.3
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assert sorted(G.in_degree(weight="other")) == [(0, 2), (1, 2.2), (2, 2)]
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assert dict(G.in_degree(weight="other")) == {0: 2, 1: 2.2, 2: 2}
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assert G.in_degree(1, weight="other") == 2.2
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assert list(G.in_degree(iter([1]), weight="other")) == [(1, 2.2)]
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def test_out_degree_weighted(self):
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G = self.K3.copy()
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G.add_edge(0, 1, weight=0.3, other=1.2)
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assert sorted(G.out_degree(weight="weight")) == [(0, 1.3), (1, 2), (2, 2)]
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assert dict(G.out_degree(weight="weight")) == {0: 1.3, 1: 2, 2: 2}
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assert G.out_degree(0, weight="weight") == 1.3
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assert sorted(G.out_degree(weight="other")) == [(0, 2.2), (1, 2), (2, 2)]
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assert dict(G.out_degree(weight="other")) == {0: 2.2, 1: 2, 2: 2}
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assert G.out_degree(0, weight="other") == 2.2
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assert list(G.out_degree(iter([0]), weight="other")) == [(0, 2.2)]
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class TestDiGraph(BaseAttrDiGraphTester, _TestGraph):
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"""Tests specific to dict-of-dict-of-dict digraph data structure"""
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def setup_method(self):
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self.Graph = nx.DiGraph
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# build dict-of-dict-of-dict K3
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ed1, ed2, ed3, ed4, ed5, ed6 = ({}, {}, {}, {}, {}, {})
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self.k3adj = {0: {1: ed1, 2: ed2}, 1: {0: ed3, 2: ed4}, 2: {0: ed5, 1: ed6}}
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self.k3edges = [(0, 1), (0, 2), (1, 2)]
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self.k3nodes = [0, 1, 2]
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self.K3 = self.Graph()
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self.K3._succ = self.k3adj # K3._adj is synced with K3._succ
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self.K3._pred = {0: {1: ed3, 2: ed5}, 1: {0: ed1, 2: ed6}, 2: {0: ed2, 1: ed4}}
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self.K3._node = {}
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self.K3._node[0] = {}
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self.K3._node[1] = {}
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self.K3._node[2] = {}
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ed1, ed2 = ({}, {})
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self.P3 = self.Graph()
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self.P3._succ = {0: {1: ed1}, 1: {2: ed2}, 2: {}}
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self.P3._pred = {0: {}, 1: {0: ed1}, 2: {1: ed2}}
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# P3._adj is synced with P3._succ
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self.P3._node = {}
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self.P3._node[0] = {}
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self.P3._node[1] = {}
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self.P3._node[2] = {}
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def test_data_input(self):
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G = self.Graph({1: [2], 2: [1]}, name="test")
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assert G.name == "test"
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assert sorted(G.adj.items()) == [(1, {2: {}}), (2, {1: {}})]
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assert sorted(G.succ.items()) == [(1, {2: {}}), (2, {1: {}})]
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assert sorted(G.pred.items()) == [(1, {2: {}}), (2, {1: {}})]
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def test_add_edge(self):
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G = self.Graph()
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G.add_edge(0, 1)
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assert G.adj == {0: {1: {}}, 1: {}}
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assert G.succ == {0: {1: {}}, 1: {}}
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assert G.pred == {0: {}, 1: {0: {}}}
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G = self.Graph()
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G.add_edge(*(0, 1))
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assert G.adj == {0: {1: {}}, 1: {}}
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assert G.succ == {0: {1: {}}, 1: {}}
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assert G.pred == {0: {}, 1: {0: {}}}
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with pytest.raises(ValueError, match="None cannot be a node"):
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G.add_edge(None, 3)
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def test_add_edges_from(self):
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G = self.Graph()
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G.add_edges_from([(0, 1), (0, 2, {"data": 3})], data=2)
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assert G.adj == {0: {1: {"data": 2}, 2: {"data": 3}}, 1: {}, 2: {}}
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assert G.succ == {0: {1: {"data": 2}, 2: {"data": 3}}, 1: {}, 2: {}}
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assert G.pred == {0: {}, 1: {0: {"data": 2}}, 2: {0: {"data": 3}}}
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with pytest.raises(nx.NetworkXError):
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G.add_edges_from([(0,)]) # too few in tuple
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with pytest.raises(nx.NetworkXError):
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G.add_edges_from([(0, 1, 2, 3)]) # too many in tuple
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with pytest.raises(TypeError):
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G.add_edges_from([0]) # not a tuple
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with pytest.raises(ValueError, match="None cannot be a node"):
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G.add_edges_from([(None, 3), (3, 2)])
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def test_remove_edge(self):
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G = self.K3.copy()
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G.remove_edge(0, 1)
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assert G.succ == {0: {2: {}}, 1: {0: {}, 2: {}}, 2: {0: {}, 1: {}}}
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assert G.pred == {0: {1: {}, 2: {}}, 1: {2: {}}, 2: {0: {}, 1: {}}}
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with pytest.raises(nx.NetworkXError):
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G.remove_edge(-1, 0)
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def test_remove_edges_from(self):
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G = self.K3.copy()
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G.remove_edges_from([(0, 1)])
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assert G.succ == {0: {2: {}}, 1: {0: {}, 2: {}}, 2: {0: {}, 1: {}}}
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assert G.pred == {0: {1: {}, 2: {}}, 1: {2: {}}, 2: {0: {}, 1: {}}}
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G.remove_edges_from([(0, 0)]) # silent fail
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def test_clear(self):
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G = self.K3
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G.graph["name"] = "K3"
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G.clear()
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assert list(G.nodes) == []
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assert G.succ == {}
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assert G.pred == {}
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assert G.graph == {}
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def test_clear_edges(self):
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G = self.K3
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G.graph["name"] = "K3"
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nodes = list(G.nodes)
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G.clear_edges()
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assert list(G.nodes) == nodes
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expected = {0: {}, 1: {}, 2: {}}
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assert G.succ == expected
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assert G.pred == expected
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assert list(G.edges) == []
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assert G.graph["name"] == "K3"
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class TestEdgeSubgraph(_TestGraphEdgeSubgraph):
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"""Unit tests for the :meth:`DiGraph.edge_subgraph` method."""
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def setup_method(self):
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# Create a doubly-linked path graph on five nodes.
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G = nx.DiGraph(nx.path_graph(5))
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# Add some node, edge, and graph attributes.
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for i in range(5):
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G.nodes[i]["name"] = f"node{i}"
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G.edges[0, 1]["name"] = "edge01"
|
||
|
|
G.edges[3, 4]["name"] = "edge34"
|
||
|
|
G.graph["name"] = "graph"
|
||
|
|
# Get the subgraph induced by the first and last edges.
|
||
|
|
self.G = G
|
||
|
|
self.H = G.edge_subgraph([(0, 1), (3, 4)])
|
||
|
|
|
||
|
|
def test_pred_succ(self):
|
||
|
|
"""Test that nodes are added to predecessors and successors.
|
||
|
|
|
||
|
|
For more information, see GitHub issue #2370.
|
||
|
|
|
||
|
|
"""
|
||
|
|
G = nx.DiGraph()
|
||
|
|
G.add_edge(0, 1)
|
||
|
|
H = G.edge_subgraph([(0, 1)])
|
||
|
|
assert list(H.predecessors(0)) == []
|
||
|
|
assert list(H.successors(0)) == [1]
|
||
|
|
assert list(H.predecessors(1)) == [0]
|
||
|
|
assert list(H.successors(1)) == []
|