426 lines
13 KiB
Python
426 lines
13 KiB
Python
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import numpy as np
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import pytest
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from pandas import (
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NA,
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Categorical,
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Float64Dtype,
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Index,
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MultiIndex,
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NaT,
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Period,
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PeriodIndex,
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Series,
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Timedelta,
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Timestamp,
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date_range,
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isna,
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)
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import pandas._testing as tm
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def test_reindex(datetime_series, string_series):
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identity = string_series.reindex(string_series.index)
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# __array_interface__ is not defined for older numpies
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# and on some pythons
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try:
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assert np.may_share_memory(string_series.index, identity.index)
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except AttributeError:
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pass
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assert identity.index.is_(string_series.index)
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assert identity.index.identical(string_series.index)
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subIndex = string_series.index[10:20]
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subSeries = string_series.reindex(subIndex)
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for idx, val in subSeries.items():
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assert val == string_series[idx]
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subIndex2 = datetime_series.index[10:20]
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subTS = datetime_series.reindex(subIndex2)
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for idx, val in subTS.items():
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assert val == datetime_series[idx]
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stuffSeries = datetime_series.reindex(subIndex)
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assert np.isnan(stuffSeries).all()
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# This is extremely important for the Cython code to not screw up
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nonContigIndex = datetime_series.index[::2]
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subNonContig = datetime_series.reindex(nonContigIndex)
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for idx, val in subNonContig.items():
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assert val == datetime_series[idx]
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# return a copy the same index here
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result = datetime_series.reindex()
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assert not (result is datetime_series)
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def test_reindex_nan():
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ts = Series([2, 3, 5, 7], index=[1, 4, np.nan, 8])
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i, j = [np.nan, 1, np.nan, 8, 4, np.nan], [2, 0, 2, 3, 1, 2]
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tm.assert_series_equal(ts.reindex(i), ts.iloc[j])
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ts.index = ts.index.astype("object")
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# reindex coerces index.dtype to float, loc/iloc doesn't
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tm.assert_series_equal(ts.reindex(i), ts.iloc[j], check_index_type=False)
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def test_reindex_series_add_nat():
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rng = date_range("1/1/2000 00:00:00", periods=10, freq="10s")
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series = Series(rng)
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result = series.reindex(range(15))
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assert np.issubdtype(result.dtype, np.dtype("M8[ns]"))
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mask = result.isna()
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assert mask[-5:].all()
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assert not mask[:-5].any()
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def test_reindex_with_datetimes():
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rng = date_range("1/1/2000", periods=20)
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ts = Series(np.random.randn(20), index=rng)
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result = ts.reindex(list(ts.index[5:10]))
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expected = ts[5:10]
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expected.index = expected.index._with_freq(None)
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tm.assert_series_equal(result, expected)
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result = ts[list(ts.index[5:10])]
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tm.assert_series_equal(result, expected)
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def test_reindex_corner(datetime_series):
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# (don't forget to fix this) I think it's fixed
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empty = Series(dtype=object)
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empty.reindex(datetime_series.index, method="pad") # it works
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# corner case: pad empty series
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reindexed = empty.reindex(datetime_series.index, method="pad")
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# pass non-Index
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reindexed = datetime_series.reindex(list(datetime_series.index))
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datetime_series.index = datetime_series.index._with_freq(None)
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tm.assert_series_equal(datetime_series, reindexed)
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# bad fill method
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ts = datetime_series[::2]
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msg = (
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r"Invalid fill method\. Expecting pad \(ffill\), backfill "
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r"\(bfill\) or nearest\. Got foo"
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)
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with pytest.raises(ValueError, match=msg):
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ts.reindex(datetime_series.index, method="foo")
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def test_reindex_pad():
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s = Series(np.arange(10), dtype="int64")
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s2 = s[::2]
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reindexed = s2.reindex(s.index, method="pad")
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reindexed2 = s2.reindex(s.index, method="ffill")
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tm.assert_series_equal(reindexed, reindexed2)
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expected = Series([0, 0, 2, 2, 4, 4, 6, 6, 8, 8], index=np.arange(10))
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tm.assert_series_equal(reindexed, expected)
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# GH4604
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s = Series([1, 2, 3, 4, 5], index=["a", "b", "c", "d", "e"])
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new_index = ["a", "g", "c", "f"]
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expected = Series([1, 1, 3, 3], index=new_index)
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# this changes dtype because the ffill happens after
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result = s.reindex(new_index).ffill()
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tm.assert_series_equal(result, expected.astype("float64"))
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result = s.reindex(new_index).ffill(downcast="infer")
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tm.assert_series_equal(result, expected)
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expected = Series([1, 5, 3, 5], index=new_index)
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result = s.reindex(new_index, method="ffill")
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tm.assert_series_equal(result, expected)
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# inference of new dtype
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s = Series([True, False, False, True], index=list("abcd"))
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new_index = "agc"
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result = s.reindex(list(new_index)).ffill()
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expected = Series([True, True, False], index=list(new_index))
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tm.assert_series_equal(result, expected)
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# GH4618 shifted series downcasting
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s = Series(False, index=range(0, 5))
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result = s.shift(1).fillna(method="bfill")
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expected = Series(False, index=range(0, 5))
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tm.assert_series_equal(result, expected)
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def test_reindex_nearest():
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s = Series(np.arange(10, dtype="int64"))
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target = [0.1, 0.9, 1.5, 2.0]
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result = s.reindex(target, method="nearest")
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expected = Series(np.around(target).astype("int64"), target)
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tm.assert_series_equal(expected, result)
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result = s.reindex(target, method="nearest", tolerance=0.2)
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expected = Series([0, 1, np.nan, 2], target)
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tm.assert_series_equal(expected, result)
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result = s.reindex(target, method="nearest", tolerance=[0.3, 0.01, 0.4, 3])
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expected = Series([0, np.nan, np.nan, 2], target)
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tm.assert_series_equal(expected, result)
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def test_reindex_int(datetime_series):
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ts = datetime_series[::2]
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int_ts = Series(np.zeros(len(ts), dtype=int), index=ts.index)
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# this should work fine
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reindexed_int = int_ts.reindex(datetime_series.index)
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# if NaNs introduced
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assert reindexed_int.dtype == np.float_
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# NO NaNs introduced
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reindexed_int = int_ts.reindex(int_ts.index[::2])
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assert reindexed_int.dtype == np.int_
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def test_reindex_bool(datetime_series):
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# A series other than float, int, string, or object
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ts = datetime_series[::2]
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bool_ts = Series(np.zeros(len(ts), dtype=bool), index=ts.index)
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# this should work fine
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reindexed_bool = bool_ts.reindex(datetime_series.index)
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# if NaNs introduced
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assert reindexed_bool.dtype == np.object_
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# NO NaNs introduced
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reindexed_bool = bool_ts.reindex(bool_ts.index[::2])
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assert reindexed_bool.dtype == np.bool_
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def test_reindex_bool_pad(datetime_series):
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# fail
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ts = datetime_series[5:]
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bool_ts = Series(np.zeros(len(ts), dtype=bool), index=ts.index)
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filled_bool = bool_ts.reindex(datetime_series.index, method="pad")
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assert isna(filled_bool[:5]).all()
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def test_reindex_categorical():
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index = date_range("20000101", periods=3)
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# reindexing to an invalid Categorical
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s = Series(["a", "b", "c"], dtype="category")
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result = s.reindex(index)
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expected = Series(
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Categorical(values=[np.nan, np.nan, np.nan], categories=["a", "b", "c"])
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)
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expected.index = index
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tm.assert_series_equal(result, expected)
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# partial reindexing
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expected = Series(Categorical(values=["b", "c"], categories=["a", "b", "c"]))
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expected.index = [1, 2]
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result = s.reindex([1, 2])
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tm.assert_series_equal(result, expected)
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expected = Series(Categorical(values=["c", np.nan], categories=["a", "b", "c"]))
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expected.index = [2, 3]
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result = s.reindex([2, 3])
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tm.assert_series_equal(result, expected)
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def test_reindex_astype_order_consistency():
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# GH#17444
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ser = Series([1, 2, 3], index=[2, 0, 1])
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new_index = [0, 1, 2]
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temp_dtype = "category"
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new_dtype = str
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result = ser.reindex(new_index).astype(temp_dtype).astype(new_dtype)
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expected = ser.astype(temp_dtype).reindex(new_index).astype(new_dtype)
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tm.assert_series_equal(result, expected)
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def test_reindex_fill_value():
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# -----------------------------------------------------------
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# floats
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floats = Series([1.0, 2.0, 3.0])
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result = floats.reindex([1, 2, 3])
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expected = Series([2.0, 3.0, np.nan], index=[1, 2, 3])
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tm.assert_series_equal(result, expected)
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result = floats.reindex([1, 2, 3], fill_value=0)
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expected = Series([2.0, 3.0, 0], index=[1, 2, 3])
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tm.assert_series_equal(result, expected)
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# -----------------------------------------------------------
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# ints
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ints = Series([1, 2, 3])
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result = ints.reindex([1, 2, 3])
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expected = Series([2.0, 3.0, np.nan], index=[1, 2, 3])
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tm.assert_series_equal(result, expected)
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# don't upcast
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result = ints.reindex([1, 2, 3], fill_value=0)
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expected = Series([2, 3, 0], index=[1, 2, 3])
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assert issubclass(result.dtype.type, np.integer)
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tm.assert_series_equal(result, expected)
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# -----------------------------------------------------------
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# objects
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objects = Series([1, 2, 3], dtype=object)
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result = objects.reindex([1, 2, 3])
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expected = Series([2, 3, np.nan], index=[1, 2, 3], dtype=object)
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tm.assert_series_equal(result, expected)
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result = objects.reindex([1, 2, 3], fill_value="foo")
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expected = Series([2, 3, "foo"], index=[1, 2, 3], dtype=object)
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tm.assert_series_equal(result, expected)
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# ------------------------------------------------------------
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# bools
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bools = Series([True, False, True])
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result = bools.reindex([1, 2, 3])
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expected = Series([False, True, np.nan], index=[1, 2, 3], dtype=object)
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tm.assert_series_equal(result, expected)
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result = bools.reindex([1, 2, 3], fill_value=False)
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expected = Series([False, True, False], index=[1, 2, 3])
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tm.assert_series_equal(result, expected)
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@pytest.mark.parametrize("dtype", ["datetime64[ns]", "timedelta64[ns]"])
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@pytest.mark.parametrize("fill_value", ["string", 0, Timedelta(0)])
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def test_reindex_fill_value_datetimelike_upcast(dtype, fill_value, using_array_manager):
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# https://github.com/pandas-dev/pandas/issues/42921
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if using_array_manager:
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pytest.skip("Array manager does not promote dtype, hence we fail")
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if dtype == "timedelta64[ns]" and fill_value == Timedelta(0):
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# use the scalar that is not compatible with the dtype for this test
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fill_value = Timestamp(0)
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ser = Series([NaT], dtype=dtype)
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result = ser.reindex([0, 1], fill_value=fill_value)
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expected = Series([None, fill_value], index=[0, 1], dtype=object)
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tm.assert_series_equal(result, expected)
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def test_reindex_datetimeindexes_tz_naive_and_aware():
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# GH 8306
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idx = date_range("20131101", tz="America/Chicago", periods=7)
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newidx = date_range("20131103", periods=10, freq="H")
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s = Series(range(7), index=idx)
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msg = (
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r"Cannot compare dtypes datetime64\[ns, America/Chicago\] "
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r"and datetime64\[ns\]"
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)
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with pytest.raises(TypeError, match=msg):
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s.reindex(newidx, method="ffill")
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def test_reindex_empty_series_tz_dtype():
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# GH 20869
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result = Series(dtype="datetime64[ns, UTC]").reindex([0, 1])
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expected = Series([NaT] * 2, dtype="datetime64[ns, UTC]")
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tm.assert_equal(result, expected)
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@pytest.mark.parametrize(
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"p_values, o_values, values, expected_values",
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[
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(
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[Period("2019Q1", "Q-DEC"), Period("2019Q2", "Q-DEC")],
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[Period("2019Q1", "Q-DEC"), Period("2019Q2", "Q-DEC"), "All"],
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[1.0, 1.0],
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[1.0, 1.0, np.nan],
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),
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(
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[Period("2019Q1", "Q-DEC"), Period("2019Q2", "Q-DEC")],
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|
|
[Period("2019Q1", "Q-DEC"), Period("2019Q2", "Q-DEC")],
|
||
|
|
[1.0, 1.0],
|
||
|
|
[1.0, 1.0],
|
||
|
|
),
|
||
|
|
],
|
||
|
|
)
|
||
|
|
def test_reindex_periodindex_with_object(p_values, o_values, values, expected_values):
|
||
|
|
# GH#28337
|
||
|
|
period_index = PeriodIndex(p_values)
|
||
|
|
object_index = Index(o_values)
|
||
|
|
|
||
|
|
ser = Series(values, index=period_index)
|
||
|
|
result = ser.reindex(object_index)
|
||
|
|
expected = Series(expected_values, index=object_index)
|
||
|
|
tm.assert_series_equal(result, expected)
|
||
|
|
|
||
|
|
|
||
|
|
def test_reindex_too_many_args():
|
||
|
|
# GH 40980
|
||
|
|
ser = Series([1, 2])
|
||
|
|
with pytest.raises(
|
||
|
|
TypeError, match=r"Only one positional argument \('index'\) is allowed"
|
||
|
|
):
|
||
|
|
ser.reindex([2, 3], False)
|
||
|
|
|
||
|
|
|
||
|
|
def test_reindex_double_index():
|
||
|
|
# GH 40980
|
||
|
|
ser = Series([1, 2])
|
||
|
|
msg = r"'index' passed as both positional and keyword argument"
|
||
|
|
with pytest.raises(TypeError, match=msg):
|
||
|
|
ser.reindex([2, 3], index=[3, 4])
|
||
|
|
|
||
|
|
|
||
|
|
def test_reindex_no_posargs():
|
||
|
|
# GH 40980
|
||
|
|
ser = Series([1, 2])
|
||
|
|
result = ser.reindex(index=[1, 0])
|
||
|
|
expected = Series([2, 1], index=[1, 0])
|
||
|
|
tm.assert_series_equal(result, expected)
|
||
|
|
|
||
|
|
|
||
|
|
@pytest.mark.parametrize("values", [[["a"], ["x"]], [[], []]])
|
||
|
|
def test_reindex_empty_with_level(values):
|
||
|
|
# GH41170
|
||
|
|
ser = Series(
|
||
|
|
range(len(values[0])), index=MultiIndex.from_arrays(values), dtype="object"
|
||
|
|
)
|
||
|
|
result = ser.reindex(np.array(["b"]), level=0)
|
||
|
|
expected = Series(
|
||
|
|
index=MultiIndex(levels=[["b"], values[1]], codes=[[], []]), dtype="object"
|
||
|
|
)
|
||
|
|
tm.assert_series_equal(result, expected)
|
||
|
|
|
||
|
|
|
||
|
|
def test_reindex_missing_category():
|
||
|
|
# GH#18185
|
||
|
|
ser = Series([1, 2, 3, 1], dtype="category")
|
||
|
|
msg = r"Cannot setitem on a Categorical with a new category \(-1\)"
|
||
|
|
with pytest.raises(TypeError, match=msg):
|
||
|
|
ser.reindex([1, 2, 3, 4, 5], fill_value=-1)
|
||
|
|
|
||
|
|
|
||
|
|
def test_reindexing_with_float64_NA_log():
|
||
|
|
# GH 47055
|
||
|
|
s = Series([1.0, NA], dtype=Float64Dtype())
|
||
|
|
s_reindex = s.reindex(range(3))
|
||
|
|
result = s_reindex.values._data
|
||
|
|
expected = np.array([1, np.NaN, np.NaN])
|
||
|
|
tm.assert_numpy_array_equal(result, expected)
|
||
|
|
with tm.assert_produces_warning(None):
|
||
|
|
result_log = np.log(s_reindex)
|
||
|
|
expected_log = Series([0, np.NaN, np.NaN], dtype=Float64Dtype())
|
||
|
|
tm.assert_series_equal(result_log, expected_log)
|