import gc import pickle import platform import pytest import networkx as nx from networkx.utils import edges_equal, graphs_equal, nodes_equal class BaseGraphTester: """Tests for data-structure independent graph class features.""" def test_contains(self): G = self.K3 assert 1 in G assert 4 not in G assert "b" not in G assert [] not in G # no exception for nonhashable assert {1: 1} not in G # no exception for nonhashable def test_order(self): G = self.K3 assert len(G) == 3 assert G.order() == 3 assert G.number_of_nodes() == 3 def test_nodes(self): G = self.K3 assert isinstance(G._node, G.node_dict_factory) assert isinstance(G._adj, G.adjlist_outer_dict_factory) assert all( isinstance(adj, G.adjlist_inner_dict_factory) for adj in G._adj.values() ) assert sorted(G.nodes()) == self.k3nodes assert sorted(G.nodes(data=True)) == [(0, {}), (1, {}), (2, {})] def test_none_node(self): G = self.Graph() with pytest.raises(ValueError): G.add_node(None) with pytest.raises(ValueError): G.add_nodes_from([None]) with pytest.raises(ValueError): G.add_edge(0, None) with pytest.raises(ValueError): G.add_edges_from([(0, None)]) def test_has_node(self): G = self.K3 assert G.has_node(1) assert not G.has_node(4) assert not G.has_node([]) # no exception for nonhashable assert not G.has_node({1: 1}) # no exception for nonhashable def test_has_edge(self): G = self.K3 assert G.has_edge(0, 1) assert not G.has_edge(0, -1) def test_neighbors(self): G = self.K3 assert sorted(G.neighbors(0)) == [1, 2] with pytest.raises(nx.NetworkXError): G.neighbors(-1) @pytest.mark.skipif( platform.python_implementation() == "PyPy", reason="PyPy gc is different" ) def test_memory_leak(self): G = self.Graph() def count_objects_of_type(_type): return sum(1 for obj in gc.get_objects() if isinstance(obj, _type)) gc.collect() before = count_objects_of_type(self.Graph) G.copy() gc.collect() after = count_objects_of_type(self.Graph) assert before == after # test a subgraph of the base class class MyGraph(self.Graph): pass gc.collect() G = MyGraph() before = count_objects_of_type(MyGraph) G.copy() gc.collect() after = count_objects_of_type(MyGraph) assert before == after def test_edges(self): G = self.K3 assert isinstance(G._adj, G.adjlist_outer_dict_factory) assert edges_equal(G.edges(), [(0, 1), (0, 2), (1, 2)]) assert edges_equal(G.edges(0), [(0, 1), (0, 2)]) assert edges_equal(G.edges([0, 1]), [(0, 1), (0, 2), (1, 2)]) with pytest.raises(nx.NetworkXError): G.edges(-1) def test_degree(self): G = self.K3 assert sorted(G.degree()) == [(0, 2), (1, 2), (2, 2)] assert dict(G.degree()) == {0: 2, 1: 2, 2: 2} assert G.degree(0) == 2 with pytest.raises(nx.NetworkXError): G.degree(-1) # node not in graph def test_size(self): G = self.K3 assert G.size() == 3 assert G.number_of_edges() == 3 def test_nbunch_iter(self): G = self.K3 assert nodes_equal(G.nbunch_iter(), self.k3nodes) # all nodes assert nodes_equal(G.nbunch_iter(0), [0]) # single node assert nodes_equal(G.nbunch_iter([0, 1]), [0, 1]) # sequence # sequence with none in graph assert nodes_equal(G.nbunch_iter([-1]), []) # string sequence with none in graph assert nodes_equal(G.nbunch_iter("foo"), []) # node not in graph doesn't get caught upon creation of iterator bunch = G.nbunch_iter(-1) # but gets caught when iterator used with pytest.raises(nx.NetworkXError, match="is not a node or a sequence"): list(bunch) # unhashable doesn't get caught upon creation of iterator bunch = G.nbunch_iter([0, 1, 2, {}]) # but gets caught when iterator hits the unhashable with pytest.raises( nx.NetworkXError, match="in sequence nbunch is not a valid node" ): list(bunch) def test_nbunch_iter_node_format_raise(self): # Tests that a node that would have failed string formatting # doesn't cause an error when attempting to raise a # :exc:`nx.NetworkXError`. # For more information, see pull request #1813. G = self.Graph() nbunch = [("x", set())] with pytest.raises(nx.NetworkXError): list(G.nbunch_iter(nbunch)) def test_selfloop_degree(self): G = self.Graph() G.add_edge(1, 1) assert sorted(G.degree()) == [(1, 2)] assert dict(G.degree()) == {1: 2} assert G.degree(1) == 2 assert sorted(G.degree([1])) == [(1, 2)] assert G.degree(1, weight="weight") == 2 def test_selfloops(self): G = self.K3.copy() G.add_edge(0, 0) assert nodes_equal(nx.nodes_with_selfloops(G), [0]) assert edges_equal(nx.selfloop_edges(G), [(0, 0)]) assert nx.number_of_selfloops(G) == 1 G.remove_edge(0, 0) G.add_edge(0, 0) G.remove_edges_from([(0, 0)]) G.add_edge(1, 1) G.remove_node(1) G.add_edge(0, 0) G.add_edge(1, 1) G.remove_nodes_from([0, 1]) def test_cache_reset(self): G = self.K3.copy() old_adj = G.adj assert id(G.adj) == id(old_adj) G._adj = {} assert id(G.adj) != id(old_adj) old_nodes = G.nodes assert id(G.nodes) == id(old_nodes) G._node = {} assert id(G.nodes) != id(old_nodes) def test_attributes_cached(self): G = self.K3.copy() assert id(G.nodes) == id(G.nodes) assert id(G.edges) == id(G.edges) assert id(G.degree) == id(G.degree) assert id(G.adj) == id(G.adj) class BaseAttrGraphTester(BaseGraphTester): """Tests of graph class attribute features.""" def test_weighted_degree(self): G = self.Graph() G.add_edge(1, 2, weight=2, other=3) G.add_edge(2, 3, weight=3, other=4) assert sorted(d for n, d in G.degree(weight="weight")) == [2, 3, 5] assert dict(G.degree(weight="weight")) == {1: 2, 2: 5, 3: 3} assert G.degree(1, weight="weight") == 2 assert nodes_equal((G.degree([1], weight="weight")), [(1, 2)]) assert nodes_equal((d for n, d in G.degree(weight="other")), [3, 7, 4]) assert dict(G.degree(weight="other")) == {1: 3, 2: 7, 3: 4} assert G.degree(1, weight="other") == 3 assert edges_equal((G.degree([1], weight="other")), [(1, 3)]) def add_attributes(self, G): G.graph["foo"] = [] G.nodes[0]["foo"] = [] G.remove_edge(1, 2) ll = [] G.add_edge(1, 2, foo=ll) G.add_edge(2, 1, foo=ll) def test_name(self): G = self.Graph(name="") assert G.name == "" G = self.Graph(name="test") assert G.name == "test" def test_str_unnamed(self): G = self.Graph() G.add_edges_from([(1, 2), (2, 3)]) assert str(G) == f"{type(G).__name__} with 3 nodes and 2 edges" def test_str_named(self): G = self.Graph(name="foo") G.add_edges_from([(1, 2), (2, 3)]) assert str(G) == f"{type(G).__name__} named 'foo' with 3 nodes and 2 edges" def test_graph_chain(self): G = self.Graph([(0, 1), (1, 2)]) DG = G.to_directed(as_view=True) SDG = DG.subgraph([0, 1]) RSDG = SDG.reverse(copy=False) assert G is DG._graph assert DG is SDG._graph assert SDG is RSDG._graph def test_copy(self): G = self.Graph() G.add_node(0) G.add_edge(1, 2) self.add_attributes(G) # copy edge datadict but any container attr are same H = G.copy() self.graphs_equal(H, G) self.different_attrdict(H, G) self.shallow_copy_attrdict(H, G) def test_class_copy(self): G = self.Graph() G.add_node(0) G.add_edge(1, 2) self.add_attributes(G) # copy edge datadict but any container attr are same H = G.__class__(G) self.graphs_equal(H, G) self.different_attrdict(H, G) self.shallow_copy_attrdict(H, G) def test_fresh_copy(self): G = self.Graph() G.add_node(0) G.add_edge(1, 2) self.add_attributes(G) # copy graph structure but use fresh datadict H = G.__class__() H.add_nodes_from(G) H.add_edges_from(G.edges()) assert len(G.nodes[0]) == 1 ddict = G.adj[1][2][0] if G.is_multigraph() else G.adj[1][2] assert len(ddict) == 1 assert len(H.nodes[0]) == 0 ddict = H.adj[1][2][0] if H.is_multigraph() else H.adj[1][2] assert len(ddict) == 0 def is_deepcopy(self, H, G): self.graphs_equal(H, G) self.different_attrdict(H, G) self.deep_copy_attrdict(H, G) def deep_copy_attrdict(self, H, G): self.deepcopy_graph_attr(H, G) self.deepcopy_node_attr(H, G) self.deepcopy_edge_attr(H, G) def deepcopy_graph_attr(self, H, G): assert G.graph["foo"] == H.graph["foo"] G.graph["foo"].append(1) assert G.graph["foo"] != H.graph["foo"] def deepcopy_node_attr(self, H, G): assert G.nodes[0]["foo"] == H.nodes[0]["foo"] G.nodes[0]["foo"].append(1) assert G.nodes[0]["foo"] != H.nodes[0]["foo"] def deepcopy_edge_attr(self, H, G): assert G[1][2]["foo"] == H[1][2]["foo"] G[1][2]["foo"].append(1) assert G[1][2]["foo"] != H[1][2]["foo"] def is_shallow_copy(self, H, G): self.graphs_equal(H, G) self.shallow_copy_attrdict(H, G) def shallow_copy_attrdict(self, H, G): self.shallow_copy_graph_attr(H, G) self.shallow_copy_node_attr(H, G) self.shallow_copy_edge_attr(H, G) def shallow_copy_graph_attr(self, H, G): assert G.graph["foo"] == H.graph["foo"] G.graph["foo"].append(1) assert G.graph["foo"] == H.graph["foo"] def shallow_copy_node_attr(self, H, G): assert G.nodes[0]["foo"] == H.nodes[0]["foo"] G.nodes[0]["foo"].append(1) assert G.nodes[0]["foo"] == H.nodes[0]["foo"] def shallow_copy_edge_attr(self, H, G): assert G[1][2]["foo"] == H[1][2]["foo"] G[1][2]["foo"].append(1) assert G[1][2]["foo"] == H[1][2]["foo"] def same_attrdict(self, H, G): old_foo = H[1][2]["foo"] H.adj[1][2]["foo"] = "baz" assert G.edges == H.edges H.adj[1][2]["foo"] = old_foo assert G.edges == H.edges old_foo = H.nodes[0]["foo"] H.nodes[0]["foo"] = "baz" assert G.nodes == H.nodes H.nodes[0]["foo"] = old_foo assert G.nodes == H.nodes def different_attrdict(self, H, G): old_foo = H[1][2]["foo"] H.adj[1][2]["foo"] = "baz" assert G._adj != H._adj H.adj[1][2]["foo"] = old_foo assert G._adj == H._adj old_foo = H.nodes[0]["foo"] H.nodes[0]["foo"] = "baz" assert G._node != H._node H.nodes[0]["foo"] = old_foo assert G._node == H._node def graphs_equal(self, H, G): assert G._adj == H._adj assert G._node == H._node assert G.graph == H.graph assert G.name == H.name if not G.is_directed() and not H.is_directed(): assert H._adj[1][2] is H._adj[2][1] assert G._adj[1][2] is G._adj[2][1] else: # at least one is directed if not G.is_directed(): G._pred = G._adj G._succ = G._adj if not H.is_directed(): H._pred = H._adj H._succ = H._adj assert G._pred == H._pred assert G._succ == H._succ assert H._succ[1][2] is H._pred[2][1] assert G._succ[1][2] is G._pred[2][1] def test_graph_attr(self): G = self.K3.copy() G.graph["foo"] = "bar" assert isinstance(G.graph, G.graph_attr_dict_factory) assert G.graph["foo"] == "bar" del G.graph["foo"] assert G.graph == {} H = self.Graph(foo="bar") assert H.graph["foo"] == "bar" def test_node_attr(self): G = self.K3.copy() G.add_node(1, foo="bar") assert all( isinstance(d, G.node_attr_dict_factory) for u, d in G.nodes(data=True) ) assert nodes_equal(G.nodes(), [0, 1, 2]) assert nodes_equal(G.nodes(data=True), [(0, {}), (1, {"foo": "bar"}), (2, {})]) G.nodes[1]["foo"] = "baz" assert nodes_equal(G.nodes(data=True), [(0, {}), (1, {"foo": "baz"}), (2, {})]) assert nodes_equal(G.nodes(data="foo"), [(0, None), (1, "baz"), (2, None)]) assert nodes_equal( G.nodes(data="foo", default="bar"), [(0, "bar"), (1, "baz"), (2, "bar")] ) def test_node_attr2(self): G = self.K3.copy() a = {"foo": "bar"} G.add_node(3, **a) assert nodes_equal(G.nodes(), [0, 1, 2, 3]) assert nodes_equal( G.nodes(data=True), [(0, {}), (1, {}), (2, {}), (3, {"foo": "bar"})] ) def test_edge_lookup(self): G = self.Graph() G.add_edge(1, 2, foo="bar") assert edges_equal(G.edges[1, 2], {"foo": "bar"}) def test_edge_attr(self): G = self.Graph() G.add_edge(1, 2, foo="bar") assert all( isinstance(d, G.edge_attr_dict_factory) for u, v, d in G.edges(data=True) ) assert edges_equal(G.edges(data=True), [(1, 2, {"foo": "bar"})]) assert edges_equal(G.edges(data="foo"), [(1, 2, "bar")]) def test_edge_attr2(self): G = self.Graph() G.add_edges_from([(1, 2), (3, 4)], foo="foo") assert edges_equal( G.edges(data=True), [(1, 2, {"foo": "foo"}), (3, 4, {"foo": "foo"})] ) assert edges_equal(G.edges(data="foo"), [(1, 2, "foo"), (3, 4, "foo")]) def test_edge_attr3(self): G = self.Graph() G.add_edges_from([(1, 2, {"weight": 32}), (3, 4, {"weight": 64})], foo="foo") assert edges_equal( G.edges(data=True), [ (1, 2, {"foo": "foo", "weight": 32}), (3, 4, {"foo": "foo", "weight": 64}), ], ) G.remove_edges_from([(1, 2), (3, 4)]) G.add_edge(1, 2, data=7, spam="bar", bar="foo") assert edges_equal( G.edges(data=True), [(1, 2, {"data": 7, "spam": "bar", "bar": "foo"})] ) def test_edge_attr4(self): G = self.Graph() G.add_edge(1, 2, data=7, spam="bar", bar="foo") assert edges_equal( G.edges(data=True), [(1, 2, {"data": 7, "spam": "bar", "bar": "foo"})] ) G[1][2]["data"] = 10 # OK to set data like this assert edges_equal( G.edges(data=True), [(1, 2, {"data": 10, "spam": "bar", "bar": "foo"})] ) G.adj[1][2]["data"] = 20 assert edges_equal( G.edges(data=True), [(1, 2, {"data": 20, "spam": "bar", "bar": "foo"})] ) G.edges[1, 2]["data"] = 21 # another spelling, "edge" assert edges_equal( G.edges(data=True), [(1, 2, {"data": 21, "spam": "bar", "bar": "foo"})] ) G.adj[1][2]["listdata"] = [20, 200] G.adj[1][2]["weight"] = 20 dd = { "data": 21, "spam": "bar", "bar": "foo", "listdata": [20, 200], "weight": 20, } assert edges_equal(G.edges(data=True), [(1, 2, dd)]) def test_to_undirected(self): G = self.K3 self.add_attributes(G) H = nx.Graph(G) self.is_shallow_copy(H, G) self.different_attrdict(H, G) H = G.to_undirected() self.is_deepcopy(H, G) def test_to_directed_as_view(self): H = nx.path_graph(2, create_using=self.Graph) H2 = H.to_directed(as_view=True) assert H is H2._graph assert H2.has_edge(0, 1) assert H2.has_edge(1, 0) or H.is_directed() pytest.raises(nx.NetworkXError, H2.add_node, -1) pytest.raises(nx.NetworkXError, H2.add_edge, 1, 2) H.add_edge(1, 2) assert H2.has_edge(1, 2) assert H2.has_edge(2, 1) or H.is_directed() def test_to_undirected_as_view(self): H = nx.path_graph(2, create_using=self.Graph) H2 = H.to_undirected(as_view=True) assert H is H2._graph assert H2.has_edge(0, 1) assert H2.has_edge(1, 0) pytest.raises(nx.NetworkXError, H2.add_node, -1) pytest.raises(nx.NetworkXError, H2.add_edge, 1, 2) H.add_edge(1, 2) assert H2.has_edge(1, 2) assert H2.has_edge(2, 1) def test_directed_class(self): G = self.Graph() class newGraph(G.to_undirected_class()): def to_directed_class(self): return newDiGraph def to_undirected_class(self): return newGraph class newDiGraph(G.to_directed_class()): def to_directed_class(self): return newDiGraph def to_undirected_class(self): return newGraph G = newDiGraph() if G.is_directed() else newGraph() H = G.to_directed() assert isinstance(H, newDiGraph) H = G.to_undirected() assert isinstance(H, newGraph) def test_to_directed(self): G = self.K3 self.add_attributes(G) H = nx.DiGraph(G) self.is_shallow_copy(H, G) self.different_attrdict(H, G) H = G.to_directed() self.is_deepcopy(H, G) def test_subgraph(self): G = self.K3 self.add_attributes(G) H = G.subgraph([0, 1, 2, 5]) self.graphs_equal(H, G) self.same_attrdict(H, G) self.shallow_copy_attrdict(H, G) H = G.subgraph(0) assert H.adj == {0: {}} H = G.subgraph([]) assert H.adj == {} assert G.adj != {} def test_selfloops_attr(self): G = self.K3.copy() G.add_edge(0, 0) G.add_edge(1, 1, weight=2) assert edges_equal( nx.selfloop_edges(G, data=True), [(0, 0, {}), (1, 1, {"weight": 2})] ) assert edges_equal( nx.selfloop_edges(G, data="weight"), [(0, 0, None), (1, 1, 2)] ) class TestGraph(BaseAttrGraphTester): """Tests specific to dict-of-dict-of-dict graph data structure""" def setup_method(self): self.Graph = nx.Graph # build dict-of-dict-of-dict K3 ed1, ed2, ed3 = ({}, {}, {}) self.k3adj = {0: {1: ed1, 2: ed2}, 1: {0: ed1, 2: ed3}, 2: {0: ed2, 1: ed3}} self.k3edges = [(0, 1), (0, 2), (1, 2)] self.k3nodes = [0, 1, 2] self.K3 = self.Graph() self.K3._adj = self.k3adj self.K3._node = {} self.K3._node[0] = {} self.K3._node[1] = {} self.K3._node[2] = {} def test_pickle(self): G = self.K3 pg = pickle.loads(pickle.dumps(G, -1)) self.graphs_equal(pg, G) pg = pickle.loads(pickle.dumps(G)) self.graphs_equal(pg, G) def test_data_input(self): G = self.Graph({1: [2], 2: [1]}, name="test") assert G.name == "test" assert sorted(G.adj.items()) == [(1, {2: {}}), (2, {1: {}})] def test_adjacency(self): G = self.K3 assert dict(G.adjacency()) == { 0: {1: {}, 2: {}}, 1: {0: {}, 2: {}}, 2: {0: {}, 1: {}}, } def test_getitem(self): G = self.K3 assert G.adj[0] == {1: {}, 2: {}} assert G[0] == {1: {}, 2: {}} with pytest.raises(KeyError): G.__getitem__("j") with pytest.raises(TypeError): G.__getitem__(["A"]) def test_add_node(self): G = self.Graph() G.add_node(0) assert G.adj == {0: {}} # test add attributes G.add_node(1, c="red") G.add_node(2, c="blue") G.add_node(3, c="red") assert G.nodes[1]["c"] == "red" assert G.nodes[2]["c"] == "blue" assert G.nodes[3]["c"] == "red" # test updating attributes G.add_node(1, c="blue") G.add_node(2, c="red") G.add_node(3, c="blue") assert G.nodes[1]["c"] == "blue" assert G.nodes[2]["c"] == "red" assert G.nodes[3]["c"] == "blue" def test_add_nodes_from(self): G = self.Graph() G.add_nodes_from([0, 1, 2]) assert G.adj == {0: {}, 1: {}, 2: {}} # test add attributes G.add_nodes_from([0, 1, 2], c="red") assert G.nodes[0]["c"] == "red" assert G.nodes[2]["c"] == "red" # test that attribute dicts are not the same assert G.nodes[0] is not G.nodes[1] # test updating attributes G.add_nodes_from([0, 1, 2], c="blue") assert G.nodes[0]["c"] == "blue" assert G.nodes[2]["c"] == "blue" assert G.nodes[0] is not G.nodes[1] # test tuple input H = self.Graph() H.add_nodes_from(G.nodes(data=True)) assert H.nodes[0]["c"] == "blue" assert H.nodes[2]["c"] == "blue" assert H.nodes[0] is not H.nodes[1] # specific overrides general H.add_nodes_from([0, (1, {"c": "green"}), (3, {"c": "cyan"})], c="red") assert H.nodes[0]["c"] == "red" assert H.nodes[1]["c"] == "green" assert H.nodes[2]["c"] == "blue" assert H.nodes[3]["c"] == "cyan" def test_remove_node(self): G = self.K3.copy() G.remove_node(0) assert G.adj == {1: {2: {}}, 2: {1: {}}} with pytest.raises(nx.NetworkXError): G.remove_node(-1) # generator here to implement list,set,string... def test_remove_nodes_from(self): G = self.K3.copy() G.remove_nodes_from([0, 1]) assert G.adj == {2: {}} G.remove_nodes_from([-1]) # silent fail def test_add_edge(self): G = self.Graph() G.add_edge(0, 1) assert G.adj == {0: {1: {}}, 1: {0: {}}} G = self.Graph() G.add_edge(*(0, 1)) assert G.adj == {0: {1: {}}, 1: {0: {}}} G = self.Graph() with pytest.raises(ValueError): G.add_edge(None, "anything") def test_add_edges_from(self): G = self.Graph() G.add_edges_from([(0, 1), (0, 2, {"weight": 3})]) assert G.adj == { 0: {1: {}, 2: {"weight": 3}}, 1: {0: {}}, 2: {0: {"weight": 3}}, } G = self.Graph() G.add_edges_from([(0, 1), (0, 2, {"weight": 3}), (1, 2, {"data": 4})], data=2) assert G.adj == { 0: {1: {"data": 2}, 2: {"weight": 3, "data": 2}}, 1: {0: {"data": 2}, 2: {"data": 4}}, 2: {0: {"weight": 3, "data": 2}, 1: {"data": 4}}, } with pytest.raises(nx.NetworkXError): G.add_edges_from([(0,)]) # too few in tuple with pytest.raises(nx.NetworkXError): G.add_edges_from([(0, 1, 2, 3)]) # too many in tuple with pytest.raises(TypeError): G.add_edges_from([0]) # not a tuple with pytest.raises(ValueError): G.add_edges_from([(None, 3), (3, 2)]) # None cannot be a node def test_remove_edge(self): G = self.K3.copy() G.remove_edge(0, 1) assert G.adj == {0: {2: {}}, 1: {2: {}}, 2: {0: {}, 1: {}}} with pytest.raises(nx.NetworkXError): G.remove_edge(-1, 0) def test_remove_edges_from(self): G = self.K3.copy() G.remove_edges_from([(0, 1)]) assert G.adj == {0: {2: {}}, 1: {2: {}}, 2: {0: {}, 1: {}}} G.remove_edges_from([(0, 0)]) # silent fail def test_clear(self): G = self.K3.copy() G.graph["name"] = "K3" G.clear() assert list(G.nodes) == [] assert G.adj == {} assert G.graph == {} def test_clear_edges(self): G = self.K3.copy() G.graph["name"] = "K3" nodes = list(G.nodes) G.clear_edges() assert list(G.nodes) == nodes assert G.adj == {0: {}, 1: {}, 2: {}} assert list(G.edges) == [] assert G.graph["name"] == "K3" def test_edges_data(self): G = self.K3 all_edges = [(0, 1, {}), (0, 2, {}), (1, 2, {})] assert edges_equal(G.edges(data=True), all_edges) assert edges_equal(G.edges(0, data=True), [(0, 1, {}), (0, 2, {})]) assert edges_equal(G.edges([0, 1], data=True), all_edges) with pytest.raises(nx.NetworkXError): G.edges(-1, True) def test_get_edge_data(self): G = self.K3.copy() assert G.get_edge_data(0, 1) == {} assert G[0][1] == {} assert G.get_edge_data(10, 20) is None assert G.get_edge_data(-1, 0) is None assert G.get_edge_data(-1, 0, default=1) == 1 def test_update(self): # specify both edgees and nodes G = self.K3.copy() G.update(nodes=[3, (4, {"size": 2})], edges=[(4, 5), (6, 7, {"weight": 2})]) nlist = [ (0, {}), (1, {}), (2, {}), (3, {}), (4, {"size": 2}), (5, {}), (6, {}), (7, {}), ] assert sorted(G.nodes.data()) == nlist if G.is_directed(): elist = [ (0, 1, {}), (0, 2, {}), (1, 0, {}), (1, 2, {}), (2, 0, {}), (2, 1, {}), (4, 5, {}), (6, 7, {"weight": 2}), ] else: elist = [ (0, 1, {}), (0, 2, {}), (1, 2, {}), (4, 5, {}), (6, 7, {"weight": 2}), ] assert sorted(G.edges.data()) == elist assert G.graph == {} # no keywords -- order is edges, nodes G = self.K3.copy() G.update([(4, 5), (6, 7, {"weight": 2})], [3, (4, {"size": 2})]) assert sorted(G.nodes.data()) == nlist assert sorted(G.edges.data()) == elist assert G.graph == {} # update using only a graph G = self.Graph() G.graph["foo"] = "bar" G.add_node(2, data=4) G.add_edge(0, 1, weight=0.5) GG = G.copy() H = self.Graph() GG.update(H) assert graphs_equal(G, GG) H.update(G) assert graphs_equal(H, G) # update nodes only H = self.Graph() H.update(nodes=[3, 4]) assert H.nodes ^ {3, 4} == set() assert H.size() == 0 # update edges only H = self.Graph() H.update(edges=[(3, 4)]) assert sorted(H.edges.data()) == [(3, 4, {})] assert H.size() == 1 # No inputs -> exception with pytest.raises(nx.NetworkXError): nx.Graph().update() class TestEdgeSubgraph: """Unit tests for the :meth:`Graph.edge_subgraph` method.""" def setup_method(self): # Create a path graph on five nodes. G = nx.path_graph(5) # Add some node, edge, and graph attributes. for i in range(5): G.nodes[i]["name"] = f"node{i}" G.edges[0, 1]["name"] = "edge01" G.edges[3, 4]["name"] = "edge34" G.graph["name"] = "graph" # Get the subgraph induced by the first and last edges. self.G = G self.H = G.edge_subgraph([(0, 1), (3, 4)]) def test_correct_nodes(self): """Tests that the subgraph has the correct nodes.""" assert [0, 1, 3, 4] == sorted(self.H.nodes()) def test_correct_edges(self): """Tests that the subgraph has the correct edges.""" assert [(0, 1, "edge01"), (3, 4, "edge34")] == sorted(self.H.edges(data="name")) def test_add_node(self): """Tests that adding a node to the original graph does not affect the nodes of the subgraph. """ self.G.add_node(5) assert [0, 1, 3, 4] == sorted(self.H.nodes()) def test_remove_node(self): """Tests that removing a node in the original graph does affect the nodes of the subgraph. """ self.G.remove_node(0) assert [1, 3, 4] == sorted(self.H.nodes()) def test_node_attr_dict(self): """Tests that the node attribute dictionary of the two graphs is the same object. """ for v in self.H: assert self.G.nodes[v] == self.H.nodes[v] # Making a change to G should make a change in H and vice versa. self.G.nodes[0]["name"] = "foo" assert self.G.nodes[0] == self.H.nodes[0] self.H.nodes[1]["name"] = "bar" assert self.G.nodes[1] == self.H.nodes[1] def test_edge_attr_dict(self): """Tests that the edge attribute dictionary of the two graphs is the same object. """ for u, v in self.H.edges(): assert self.G.edges[u, v] == self.H.edges[u, v] # Making a change to G should make a change in H and vice versa. self.G.edges[0, 1]["name"] = "foo" assert self.G.edges[0, 1]["name"] == self.H.edges[0, 1]["name"] self.H.edges[3, 4]["name"] = "bar" assert self.G.edges[3, 4]["name"] == self.H.edges[3, 4]["name"] def test_graph_attr_dict(self): """Tests that the graph attribute dictionary of the two graphs is the same object. """ assert self.G.graph is self.H.graph