import pytest np = pytest.importorskip("numpy") pytest.importorskip("scipy") import networkx as nx from networkx.generators.degree_seq import havel_hakimi_graph class TestBetheHessian: @classmethod def setup_class(cls): deg = [3, 2, 2, 1, 0] cls.G = havel_hakimi_graph(deg) cls.P = nx.path_graph(3) def test_bethe_hessian(self): "Bethe Hessian matrix" # fmt: off H = np.array([[4, -2, 0], [-2, 5, -2], [0, -2, 4]]) # fmt: on permutation = [2, 0, 1] # Bethe Hessian gives expected form np.testing.assert_equal(nx.bethe_hessian_matrix(self.P, r=2).todense(), H) # nodelist is correctly implemented np.testing.assert_equal( nx.bethe_hessian_matrix(self.P, r=2, nodelist=permutation).todense(), H[np.ix_(permutation, permutation)], ) # Equal to Laplacian matrix when r=1 np.testing.assert_equal( nx.bethe_hessian_matrix(self.G, r=1).todense(), nx.laplacian_matrix(self.G).todense(), ) # Correct default for the regularizer r np.testing.assert_equal( nx.bethe_hessian_matrix(self.G).todense(), nx.bethe_hessian_matrix(self.G, r=1.25).todense(), )